Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g02470 ATGGCTTCAGCCACCTCTTCGCCTACGGCTCAGAGGCACGTTGGCTTCAGCCACCGCACGCAGGCGCCGTTCCAGCTGAACGACTCCTCGAGCCAGCTCCATGACGAGCTCCATGACGACTCGCCGCCGGTGAGGAAGTACCGGCTGATGTCAGACATAATGGCGCGCGCCCAGTACGCGGTGGTGGAGAGAGAGACGTATAGTGATCTGTTGTGCGAGCAATGCGGTTCCGGCGAGCTGTCGGAGGAGCTCCTTCTCTGCGACAAATGCGACAAAGGCTTCCACATGAAATGCGTGAGGCCGATTGTTGTGAGGATTCCGATTGGATCGTGGCTTTGTCCTAAGTGTCAGGGAGGGAAGAGAGTGCGGACTTTCTCGCAGAAGAGGATAATTGATTTCTTCGGGATTGGTAGGAGTTATTTTTATGCGGATGACAAGTGTTCTTCTCTGGAGGCCAAGAAACGTAGGAAACGTTCAAGACCTCTGGTATTACATAAGAAAAAAAGGAGGTTGTTACCATTTGTTCCTTCAAAAGATCCTGTCCAGAGATTGAAACAGATGGGTTCCCTTGCTTCTGCTTTAACAGCATCAAATATAGAATTCTGTGATCACCTCACATACTCGCCTGGAATGGCTCCTAGATCTGCGAATCGATCCGCATTCGAAAACGGTGACATGCAGATTCTTTGCAAAGAAGACTTGGAGACAGTAGAACACTGCATTGCTATGTCTAAACGAGGCGAATTCCCTCCCTTTATGGTTGTTTATGATTTGTGTCAAGGTTATACTGTTGAGGCTGATGACCTAATCAAGGATATGACAGTTGTTGCTGAATACACTGGCGATGTGGATTACCTTCACAACCGGGAACGTGATGATTGTGACAGTATGATGACCCTTCTTCTTGGAAGAGAAAGTTCTCAAAGTCTTGTTATCTGTGCTGATAAGCGTGGAAACGTTGCTCGCTTTATAAGCGGGATAAACAATCATACACAGGAAGGTAGGAAGAAGCAAAACTGCAAATGTGTGAGATACAATGTTGGTGGTGAATGCAGGGTCTTTTTGGTTGCTACTCGTGATATTTTTAAGGGAGAAAGGCTTTATTATGATTATAATGGTTATGAGTATCACTATCCGACTCATCATTTTGTCTGA 1155 0.4675 MASATSSPTAQRHVGFSHRTQAPFQLNDSSSQLHDELHDDSPPVRKYRLMSDIMARAQYAVVERETYSDLLCEQCGSGELSEELLLCDKCDKGFHMKCVRPIVVRIPIGSWLCPKCQGGKRVRTFSQKRIIDFFGIGRSYFYADDKCSSLEAKKRRKRSRPLVLHKKKRRLLPFVPSKDPVQRLKQMGSLASALTASNIEFCDHLTYSPGMAPRSANRSAFENGDMQILCKEDLETVEHCIAMSKRGEFPPFMVVYDLCQGYTVEADDLIKDMTVVAEYTGDVDYLHNRERDDCDSMMTLLLGRESSQSLVICADKRGNVARFISGINNHTQEGRKKQNCKCVRYNVGGECRVFLVATRDIFKGERLYYDYNGYEYHYPTHHFV* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g02470 384 PANTHER N-LYSINE METHYLTRANSFERASE KMT5A 147 382 - -
Phac9g02470 384 ProSiteProfiles Zinc finger PHD-type profile. 69 119 IPR019787 -
Phac9g02470 384 ProSitePatterns Zinc finger PHD-type signature. 72 116 IPR019786 -
Phac9g02470 384 CDD PHD_RSF1 71 116 - -
Phac9g02470 384 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 16 130 IPR013083 -
Phac9g02470 384 Gene3D SET domain 155 384 IPR046341 -
Phac9g02470 384 SUPERFAMILY SET domain 242 373 IPR046341 -
Phac9g02470 384 SMART PHD_3 71 117 IPR001965 -
Phac9g02470 384 Pfam PHD-finger 72 117 IPR019787 -
Phac9g02470 384 CDD SET_ATXR5_6-like 247 384 - -
Phac9g02470 384 Pfam SET domain 297 372 IPR001214 GO:0005515
Phac9g02470 384 SUPERFAMILY FYVE/PHD zinc finger 62 122 IPR011011 -
Phac9g02470 384 ProSiteProfiles SET domain profile. 250 372 IPR001214 GO:0005515
Phac9g02470 384 FunFam Histone-lysine N-methyltransferase ATXR5 155 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g02470 Phac-Chr9 23405890 23409905 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g02470 43 125 C2H2 Transcription Factor Family AT3G01460 36.471 3.92e-08 53.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Phac9g02470 SET 2.5e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g02470 K24406 - gmx:100785817 630.943