Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g02451 ATGCTGCAAATATCTACTTCACCGGAAACCCCTCTAGCGAATCCGGAGGGAGACGCCGCGCCGGTCTCCGAGGGCCTGAAAGCGGAGCATGGCGAAGACCGTGACCGGAATTCCGCCGCGAGCCGATGGCCTAAAGAGGAGACAATGGCTTTGCTTAATATAAGGTCTGACATGGACGTTGCTTTCAGAGATACAAACCCCAAAGCCCCTCTCTGGGAACAAGTCTCAAGGAAATTAGCGGAGCTAGGATATAACAGGAGTGCGAAGAAGTGCAGGGAGAAATTCGAGAACATTTACAAGTACCATAGGAGAATCAAGGAAGGTCGTAGTGGCAAATCCAACGGTAGCAAGACTTATAGATTTTTCGAGCAATTGGAAGCTTTAGAAGGACATCACTCACTTCTCCCTCCTTCAGTAAGCGACCCAGAAACAACTACCACAACAACAACCCACGTGCCCGACAACAAAATCAACCCCATCAACAACGTTGATGTTATTTTAGATGCGGTTCCGTGTTCCGTAAGTGCTTACGCGGGGGAGCATTCTAGTTCGACGACTTCATGTTCGGGGAAGGAGTTTAGGAAGAAGAAGCTGACGCGGTTTCTGGAGGGGTTGATGAGGGAAGTGATAGAGAAGCAAGAGACGCTGCAGAGGAAGTTCATGGAGGTGTTGGAGAAGTGCGAGAAGGATCGAGTGGCGAGGGAGGAGGCGTGGAAGAAGGAGGAGCTGGCCCTGATTAAGAAAGAGCGGGAGCTTCTGGCTCAGGAACGCTCAATCGCGGCGGCTAAAGATGAAGTCGTCCTTGCTTTTCTAAGAAAGTTCGCCGAAGCTGAAGGCACGGTGCAGTTGCTGGAGAAAATTCAGGTTCAAAACGACAAGCACAGGAACATGCAACAAAGTGGGAATATTAATGTTAGTGCTAATGGAGGTGGTGATGTGAGTGATGTGGATAAGCGAGAGTGTGGGAATAATTTGAGTGTTAGGAATTTCGTGCATATGAGTAGTTCGCGGTGGCCGAAGGATGAAGTGGAGGCTTTGATAAGGCTGAGGACTCAACTTGATGTGCAGTCCCAAGGGAACAATAATAGTAGTAACGGTGTGTCAAAGGGGCCTCTTTGGGAGGAAATATCTTTGGCCATGAAGGGCCTTGGCTACGATCGCAGTGCGAAGAGGTGCAAAGAGAAATGGGAGAACATAAACAAGTATTTCAAGAGGATGAAGGAGAAGAACAAGAGGAAGCCTGAGGATTCCAAAACCTGTCCCTATTATCACCACCTGGAGGTTTTGTACAGCAAGAAGCCTAAGAGGGTGGATGTAAATGATTTTGGGAACGAGTTGAAGCCCGAGGAGCTCTTGATGCATATCATGGAGAGTCAAAGTCAAGAAGAGAGACAAGCGCAGGAACAACAGCTACAGAGTCAGTCATCATCTGAACATGGAGAGAGAGAGAATAGGGATAAGCATGAGGAAGATGATGAAGATCAAAATGGGTTTCAGAATGTGATGGTTGAAGATAGTCCTTCCATAACAATTATGAGTTAA 1542 0.4786 MLQISTSPETPLANPEGDAAPVSEGLKAEHGEDRDRNSAASRWPKEETMALLNIRSDMDVAFRDTNPKAPLWEQVSRKLAELGYNRSAKKCREKFENIYKYHRRIKEGRSGKSNGSKTYRFFEQLEALEGHHSLLPPSVSDPETTTTTTTHVPDNKINPINNVDVILDAVPCSVSAYAGEHSSSTTSCSGKEFRKKKLTRFLEGLMREVIEKQETLQRKFMEVLEKCEKDRVAREEAWKKEELALIKKERELLAQERSIAAAKDEVVLAFLRKFAEAEGTVQLLEKIQVQNDKHRNMQQSGNINVSANGGGDVSDVDKRECGNNLSVRNFVHMSSSRWPKDEVEALIRLRTQLDVQSQGNNNSSNGVSKGPLWEEISLAMKGLGYDRSAKRCKEKWENINKYFKRMKEKNKRKPEDSKTCPYYHHLEVLYSKKPKRVDVNDFGNELKPEELLMHIMESQSQEERQAQEQQLQSQSSSEHGERENRDKHEEDDEDQNGFQNVMVEDSPSITIMS* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g02451 513 MobiDBLite consensus disorder prediction 458 513 - -
Phac9g02451 513 MobiDBLite consensus disorder prediction 133 156 - -
Phac9g02451 513 MobiDBLite consensus disorder prediction 499 513 - -
Phac9g02451 513 CDD GT1 41 106 - -
Phac9g02451 513 MobiDBLite consensus disorder prediction 1 44 - -
Phac9g02451 513 ProSiteProfiles Myb-like domain profile. 35 99 IPR001005 -
Phac9g02451 513 SMART sant 39 101 IPR001005 -
Phac9g02451 513 SMART sant 334 402 IPR001005 -
Phac9g02451 513 FunFam Trihelix transcription factor GT-2 338 405 - -
Phac9g02451 513 ProSiteProfiles Myb-like domain profile. 336 400 IPR001005 -
Phac9g02451 513 MobiDBLite consensus disorder prediction 23 42 - -
Phac9g02451 513 MobiDBLite consensus disorder prediction 478 495 - -
Phac9g02451 513 Gene3D - 43 104 - -
Phac9g02451 513 Gene3D - 338 405 - -
Phac9g02451 513 PANTHER FI21293P1 21 489 - -
Phac9g02451 513 FunFam Trihelix transcription factor GT-2 43 104 - -
Phac9g02451 513 CDD GT1 336 407 - -
Phac9g02451 513 MobiDBLite consensus disorder prediction 138 156 - -
Phac9g02451 513 Pfam Myb/SANT-like DNA-binding domain 41 128 IPR044822 -
Phac9g02451 513 Pfam Myb/SANT-like DNA-binding domain 336 427 IPR044822 -
Phac9g02451 513 Coils Coil 245 265 - -
Phac9g02451 513 MobiDBLite consensus disorder prediction 458 477 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g02451 Phac-Chr9 23225015 23228410 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g02451 32 435 Trihelix Transcription Factor Family AT1G76880 43.696 7.00e-111 340
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Phac9g02451 Myb_DNA-bind_4 1.2e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g02451 - - pvu:PHAVU_009G147500g 931.784