Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g02444 ATGAGATCCCTTCTCCAAACGAAGCAGTTGTTGGCGGTTAGGGTTCAGAGGCATCAGTTGTGGCACCACTCTCGAGACGTCAAGGTTTCGGTGTGGTGGGATTTCGAGAACTGCCAGGTGCCGGCGGGGGTTAACGCTCTGGATGTGGCGCCGGCGATCACGAAGGCTGTGAGAGCGAGTGGTATTAAGGGCCCTCTCCGAATCAACGCTTTCGGTGATGTTCTGCAGCTCTCAAAACCCAACCAGCAAGCACTTTCTCACACTGGCATTCATTTCACCCACATTCCAGGTGGAAAGAACAGTGCCGATAGATTTCTTCTCATGAATCTTATGGATTGGGTTTCTCAAAATCCTCCGCCTGCCCATCTCTTTTTGATATCTGCTGATGGAGACTTTGCTGGAATGTTACACCGGTTAAGAATACATAATTACAATATATTACTTGCTAGCACAAGGAATGCTCCTGGTGTCCTCTGCAGTGCAGCAACTATAATATGGCAATGGTCTTCATTAGTAAAAGGGGAACATCTTTCTGGAAAACATTTAAGCCATCCTCCTGATGGTTTGTTTGGTTCTTGGTGTGGAAATTACAAGGTGATTCCGGAAAAACCATTCTCAGATGTTGAGAAGTCTGCATCTTCAGAAAAAGTGGGCATATACAAACCTTCCTTAGATTTGCACACTGTTCCAAAAAAAGTTGTAATACAGGTTTGCCGTATATTAAGGTCACATCCAAAAGGAATCTCAATTAGAGATCTTCGTATAGAGTTGAAGAAACGTAAAGTGAATTTTGGTAAAAAGTTTTATGGATATGGAACATTTTCTCGCTTTCTAACATCAACACTGCATGTAGAGCTTGAGCCTTTAGGCTTTGGTAATTTTCATGTATGTCTGATCCCCTCAGAATCCCCCAAACCTTTTGAGGGAAAAGTTGTGGAATCAGTAGCATCTTGTATTAAGATCGATAAGAACGGATCTGCAGCAACTCCAAAGCTAAAAGGCAAGAATAAAAACAAGGTTAGAGAAGCAAATTGGACACCCTTAACTGCATCATCTCATGAAAGGAGTATGGATGAGGATTCAAAATCATCACTTTCATTGGTTGAAAGACATGTGTCTCAGCCCCCAGATGCGTTGCAGAAATTTTCAGCGTGTAGTGGGAAGGTTGTTGATATGACTACTGAACAACTGTCAGAGATTCAACCACAACACAAGGACAACCAACTTTCCAAAACTAAGCCAGATTCCTTAAAATTGAGTTCGAATTCTAAAACATTATCTGATTGTGACATTGTTGGCTCTGAGGATGCAAGTTATAGAATTCAGGAAAAATACACGACTTCAAGGAATCACTCTGCTGGAAATGATCAGGTTGATGAAGTTTGTCATAGCCCATATTGTACACAAGCTGATGACTCTCTGCTTGATAAAATACCTAGTGGAAGTGATAAAGCTAATAGGAATGGCCCAACATTCTTTGTCTGGATCAGAGCCTGGTGGCAATTTTGGAAAGGCAATGCAGAATCTGGTGTTTCAGCTGATTATCATAACAGGGTGGTTAGTCATTTCGAGGATTCTAACCCATCTGAACTAGTAGAGCAAACAGCTCAGGTTGTGAGTGATTTTAAAGAACCCAAGTTATCAGAGCTGGACCAGCCTGAGTTGTTTTCTAGCGGTGCCTTTTGGGATGAGATAGAAACTTTTATTTTCACGCTCAAAGGATCATTAATTGTTTCCCAGTCGAAAAACAGGTTACGCACTAATCTTGTACAAATCTTTTAA 1782 0.4175 MRSLLQTKQLLAVRVQRHQLWHHSRDVKVSVWWDFENCQVPAGVNALDVAPAITKAVRASGIKGPLRINAFGDVLQLSKPNQQALSHTGIHFTHIPGGKNSADRFLLMNLMDWVSQNPPPAHLFLISADGDFAGMLHRLRIHNYNILLASTRNAPGVLCSAATIIWQWSSLVKGEHLSGKHLSHPPDGLFGSWCGNYKVIPEKPFSDVEKSASSEKVGIYKPSLDLHTVPKKVVIQVCRILRSHPKGISIRDLRIELKKRKVNFGKKFYGYGTFSRFLTSTLHVELEPLGFGNFHVCLIPSESPKPFEGKVVESVASCIKIDKNGSAATPKLKGKNKNKVREANWTPLTASSHERSMDEDSKSSLSLVERHVSQPPDALQKFSACSGKVVDMTTEQLSEIQPQHKDNQLSKTKPDSLKLSSNSKTLSDCDIVGSEDASYRIQEKYTTSRNHSAGNDQVDEVCHSPYCTQADDSLLDKIPSGSDKANRNGPTFFVWIRAWWQFWKGNAESGVSADYHNRVVSHFEDSNPSELVEQTAQVVSDFKEPKLSELDQPELFSSGAFWDEIETFIFTLKGSLIVSQSKNRLRTNLVQIF* 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g02444 593 ProSiteProfiles OST-type HTH domain profile. 229 300 IPR025605 -
Phac9g02444 593 PANTHER LIMKAIN B LKAP 15 426 IPR024768 GO:0005777|GO:0010468
Phac9g02444 593 MobiDBLite consensus disorder prediction 398 424 - -
Phac9g02444 593 Pfam NYN domain 28 162 IPR021139 GO:0004540
Phac9g02444 593 CDD PIN_limkain_b1_N_like 28 150 - -
Phac9g02444 593 MobiDBLite consensus disorder prediction 327 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g02444 Phac-Chr9 23135684 23139693 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g02444 27 174 C2H2 Transcription Factor Family AT5G61190 42.953 6.28e-33 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g02444 - - vun:114196141 1004.59