Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g02443 ATGAGATCCCTTCTCCAAACGAAGCAGTTGTTGGCGGTTAGGGTTCAGAGGCATCAGTTGTGGCACCACTCTCGAGACGTCAAGGTTTCGGTGTGGTGGGATTTCGAGAACTGCCAGGTGCCGGCGGGGGTTAACGCTCTGGATGTGGCGCCGGCGATCACGAAGGCTGTGAGAGCGAGTGGTATTAAGGGCCCTCTCCGAATCAACGCTTTCGGTGATGTTCTGCAGCTCTCAAAACCCAACCAGCAAGCACTTTCTCACACTGGCATTCATTTCACCCACATTCCAGGTGGAAAGAACAGTGCCGATAGATTTCTTCTCATGAATCTTATGGATTGGGTTTCTCAAAATCCTCCGCCTGCCCATCTCTTTTTGATATCTGCTGATGGAGACTTTGCTGGAATGTTACACCGGTTAAGAATACATAATTACAATATATTACTTGCTAGCACAAGGAATGCTCCTGGTGTCCTCTGCAGTGCAGCAACTATAATATGGCAATGGTCTTCATTAGTAAAAGGGGAACATCTTTCTGGAAAACATTTAAGCCATCCTCCTGATGGTTTGTTTGGTTCTTGGTGTGGAAATTACAAGGTGATTCCGGAAAAACCATTCTCAGATGTTGAGAAGTCTGCATCTTCAGAAAAAGTGGGCATATACAAACCTTCCTTAGATTTGCACACTGTTCCAAAAAAAGTTGTAATACAGGTTTGCCGTATATTAAGGTCACATCCAAAAGGAATCTCAATTAGAGATCTTCGTATAGAGTTGAAGAAACGTAAAGTGAATTTTGGTAAAAAGTTTTATGGATATGGAACATTTTCTCGCTTTCTAACATCAACACTGCATGTAGAGCTTGAGCCTTTAGGCTTTGGTAATTTTCATGTATGTCTGATCCCCTCAGAATCCCCCAAACCTTTTGAGGGAAAAGTTGTGGAATCAGTAGCATCTTGTATTAAGATCGATAAGAACGGATCTGCAGCAACTCCAAAGCTAAAAGGCAAGAATAAAAACAAGGTTAGAGAAGCAAATTGGACACCCTTAACTGCATCATCTCATGAAAGGAGTATGGATGAGGATTCAAAATCATCACTTTCATTGGTTGAAAGACATGTGTCTCAGCCCCCAGATGCGTTGCAGAAATTTTCAGCGTGTAGTGGGAAGGTTGTTGATATGACTACTGAACAACTGTCAGAGATTCAACCACAACACAAGGACAACCAACTTTCCAAAACTAAGCCAGATTCCTTAAAATTGAGTTCGAATTCTAAAACATTATCTGATTGTGACATTGTTGGCTCTGAGGATGCAAGTTATAGAATTCAGGAAAAATACACGACTTCAAGGAATCACTCTGCTGGAAATGATCAGGTTGATGAAGTTTGTCATAGCCCATATTGTACACAAGCTGATGACTCTCTGCTTGATAAAATACCTAGTGGAAGTGATAAAGCTAATAGGAATGGCCCAACATTCTTTGTCTGGATCAGAGCCTGGTGGCAATTTTGGAAAGGCAATGCAGAATCTGGTGTTTCAGCTGATTATCATAACAGGGTGGTTAGTCATTTCGAGGATTCTAACCCATCTGAACTAGTAGAGCAAACAGCTCAGGTTGTGAGTGATTTTAAAGAACCCAAGTTATCAGAGCTGGACCAGCCTGAGTTGTTTTCTAGCGGTGCCTTTTGGGATGAGATAGAAACTTTTATTTTCACGCTCAAAGGATCATTAATTGTTTCCCAGTCGAAAAACAGGGAGGATATGGCGTATAAATTGCTAAAGGATGGACCCCCAGTTTTAAGATCTCTCACTGAAGAAGATATTCTTCAATTGGTGGAGTTGTTAATATCAGAGAAAAAGTGGTTGGAGGAAAACCCGTCCCAAATATTTCCTTTTAGGGTAACTAAGCTAGTTCAGGGGAACTCATTGATGGGCCAATCTCAGGGTGCAAATGGTTTGAGATCCCTCTTTCTGAGCAGATCATCACAATCCAAGTTGCAAAAATCATCTGAACTTGATATGGAAAAATACGATAAGAGTATTCCTAAATCTGAAGTTTCTGCAACTGCCACTGAGACGAAATATAAGGGGAGGTCTGGAAAGGATATATTAGAAGATTGTTCGTAA 2124 0.4153 MRSLLQTKQLLAVRVQRHQLWHHSRDVKVSVWWDFENCQVPAGVNALDVAPAITKAVRASGIKGPLRINAFGDVLQLSKPNQQALSHTGIHFTHIPGGKNSADRFLLMNLMDWVSQNPPPAHLFLISADGDFAGMLHRLRIHNYNILLASTRNAPGVLCSAATIIWQWSSLVKGEHLSGKHLSHPPDGLFGSWCGNYKVIPEKPFSDVEKSASSEKVGIYKPSLDLHTVPKKVVIQVCRILRSHPKGISIRDLRIELKKRKVNFGKKFYGYGTFSRFLTSTLHVELEPLGFGNFHVCLIPSESPKPFEGKVVESVASCIKIDKNGSAATPKLKGKNKNKVREANWTPLTASSHERSMDEDSKSSLSLVERHVSQPPDALQKFSACSGKVVDMTTEQLSEIQPQHKDNQLSKTKPDSLKLSSNSKTLSDCDIVGSEDASYRIQEKYTTSRNHSAGNDQVDEVCHSPYCTQADDSLLDKIPSGSDKANRNGPTFFVWIRAWWQFWKGNAESGVSADYHNRVVSHFEDSNPSELVEQTAQVVSDFKEPKLSELDQPELFSSGAFWDEIETFIFTLKGSLIVSQSKNREDMAYKLLKDGPPVLRSLTEEDILQLVELLISEKKWLEENPSQIFPFRVTKLVQGNSLMGQSQGANGLRSLFLSRSSQSKLQKSSELDMEKYDKSIPKSEVSATATETKYKGRSGKDILEDCS* 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g02443 707 MobiDBLite consensus disorder prediction 665 707 - -
Phac9g02443 707 MobiDBLite consensus disorder prediction 327 364 - -
Phac9g02443 707 ProSiteProfiles OST-type HTH domain profile. 229 300 IPR025605 -
Phac9g02443 707 MobiDBLite consensus disorder prediction 398 424 - -
Phac9g02443 707 PANTHER LIMKAIN B LKAP 15 674 IPR024768 GO:0005777|GO:0010468
Phac9g02443 707 Pfam OST-HTH Associated domain 583 633 IPR025677 -
Phac9g02443 707 CDD PIN_limkain_b1_N_like 28 150 - -
Phac9g02443 707 Pfam NYN domain 28 162 IPR021139 GO:0004540
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g02443 Phac-Chr9 23135684 23139693 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g02443 27 174 C2H2 Transcription Factor Family AT5G61190 42.953 8.81e-33 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g02443 - - vun:114196141 1169.84