Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g02439 ATGGATTTGGACGATTTCCGATCCATATTGGACACCTCGGGCGTCGACGTGTGGATGTTCATCGACGCCGCAATCGCCGTCGCCTCCGCGGACTGCGCCGCGGAATTGAAGCGCCGCCGCGACTCCATCGTGGAAAGCCTCTACTCCGCCACGGCCGCGCCTCCGCGGTGCCGCAATTGTGACGACGGCCACCTCCTCAGGACCAACGGCCACCAAATCACGAAGCAGAACAGCCCTAGCCCTAGCCCCGTGCGGCAACCTCACCGACGCCGTGCCGCCGAAGCCGCCAATTCTCCCGCCACGCCGCAGTCTCTGGAAAACGATGACGGCGGCGAGGATTTGGATCCTTACGGTGGTCTGTTCGACGACGAACAGAAGAAGATTCTAGAGATTAAAGAGCAACTCGAAGAGCCTGATCAGTCTGAAGATTCCTTGGTGGAGTTGCTGCAAAGCCTCGCGGACATGGATATTACATTCCAGGCTTTGAAGGAAACTGACATCGGGAGGCACGTGAATCGGTTAAGGAAGCATCCTTCAAACGACGTTCGTCGATTGGTGAAGCTCCTTGTCAGGAAGTGGAAGGAAATTGTGGATGAGTGGGTGAAGCTGAAACCACAGGGAGGAAGCGACACTCTGATGGCTGATGGAGACTCGCCTGTGCAGAAAACCACCCAAAATGGGCATCATCATCAGATTCCTGATTTTGCATACTCGCCAAATCCACACAATGGTAGCTCAGGGTCTGACCGTAACAACTCAGAAGCAGAACACAAACCGAAAGTAATTCCCCGCAGTGAACCTCGGCCAAAACCCACGCCAGCACCGTCAATTTCAACCCCTGCTTCCGCTTCTCAAAACAGACAAAGAGACAGCAGTTTTGACGCGGAGAGGCTGGCTTCAGCCAGAAGGCGGCTTCAAGAGAACTACAAAGAGGCTGAAAATGGTGGAATTTTCGTCTCTATAATTTTCATTTTCATGCTGTATTTCTTTATCTCTCTATATAACCGACTTGTAATTTGGTGTGTTTGTGCGGTGTATAGCCAAAAGGCAAAGAACGATTCAGGTTATGGATATCAACGAGTTACCAAAGTCAAAACCCAAGAATGCCTTCTTTGGGAAGAACAAAGGTGGTGGTGGTTCTCAGGGAAGGCACTGGTGATGATAATGAAGCATGTTGTATCCATTGTTGGTGGTGCCATTTTGCGTGTAAAAAAACACAGCCTTGTGGCGGTGCCGGATAAGTCCCAAACCCTGTTCATCATCCCTGTGGATTTTTCCTCCGCTCATAAACTTTTTTTTTTCCTGTGGTTTTTATTTAAGTCAATAATAACCGAAGAAAAGAACTCCTCAATATATTTTTTTCTTGAAAGGGGTACACATCGAACCCACGTTTGTCGGTTTGTGGAGGAGCACGTGATTTCAGGAAACAAGATGGGGATGGTACGGGGGGTAGGGGGCTAA 1461 0.5024 MDLDDFRSILDTSGVDVWMFIDAAIAVASADCAAELKRRRDSIVESLYSATAAPPRCRNCDDGHLLRTNGHQITKQNSPSPSPVRQPHRRRAAEAANSPATPQSLENDDGGEDLDPYGGLFDDEQKKILEIKEQLEEPDQSEDSLVELLQSLADMDITFQALKETDIGRHVNRLRKHPSNDVRRLVKLLVRKWKEIVDEWVKLKPQGGSDTLMADGDSPVQKTTQNGHHHQIPDFAYSPNPHNGSSGSDRNNSEAEHKPKVIPRSEPRPKPTPAPSISTPASASQNRQRDSSFDAERLASARRRLQENYKEAENGGIFVSIIFIFMLYFFISLYNRLVIWCVCAVYSQKAKNDSGYGYQRVTKVKTQECLLWEEQRWWWFSGKALVMIMKHVVSIVGGAILRVKKHSLVAVPDKSQTLFIIPVDFSSAHKLFFFLWFLFKSIITEEKNSSIYFFLERGTHRTHVCRFVEEHVISGNKMGMVRGVGG* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g02439 486 MobiDBLite consensus disorder prediction 61 119 - -
Phac9g02439 486 MobiDBLite consensus disorder prediction 216 231 - -
Phac9g02439 486 ProSiteProfiles TFIIS N-terminal domain profile. 123 200 IPR017923 -
Phac9g02439 486 SMART TFS2_5 128 199 IPR003617 GO:0005634
Phac9g02439 486 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 26C-RELATED 1 315 IPR044790 -
Phac9g02439 486 Pfam TFIIS helical bundle-like domain 148 197 IPR017923 -
Phac9g02439 486 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 126 209 IPR035441 -
Phac9g02439 486 Coils Coil 295 315 - -
Phac9g02439 486 MobiDBLite consensus disorder prediction 206 294 - -
Phac9g02439 486 CDD TFIIS_I 125 198 - -
Phac9g02439 486 MobiDBLite consensus disorder prediction 69 84 - -
Phac9g02439 486 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 122 209 IPR035441 -
Phac9g02439 486 MobiDBLite consensus disorder prediction 251 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g02439 Phac-Chr9 23121970 23126832 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Phac9g02439 Med26 5.6e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g02439 - - gmx:100804034 514.612