Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g02417 ATGTCTCCACCATTACTGGGCATAGGGGAGGAGGAGGGTAAAAGCAATGTCACTTTGTTGGTTTCCTCATCAACCACCATGGAAAGTGTGTGCCTCAAGACCTTAGAATTAAAAGAACGCAACTACATGGGCTTATCTGATTGTTCTTCTGTGGACAGCTCAGTTCCGTCCTTCTCAGAAGAGACTAAAAGTAATCTGAACCTGAAAGCCACTGAGCTCACGCTTGGGCTTCCGGGATCACAGTCCTCTGAAAGAGATTCCGATCTTTGCTTAAGAAGCTCAACTCAATTTGATGAAAAAGCCTTGTTTCCTTTGTGTCCTCTGGCTGATGATCACCACTCTTCAACCAAGACTGCTGTTTTGGGAAACAAGAGAGGATTTTCAGATGCCATGAATGGCTTCTCAGAGGGGAAGTTCTTGGTTGATTCGGAGGCCAATCCGATACTATCTCCCAGGCCCGCTTCGAACTTGGGACTAAATCCTGGTTCTACACTTGAGAAGGCTGGGGCTCTGCAAAACAAAATGAAAGAAGCAGCAACAACAAAGATGGGGCTCGATAGGCCTCATTCAGCCAATGAAACTAGACCAAGTATTCATTGTTCTGCTAATAATAACAACAGTGCACCGGCTACCAAGGCTCAGGTTGTGGGGTGGCCTCCTATAAGATCATTCAGGAAGAATTCATTGGCAACTAATTCAAAGAACAATGAAGAAGTTGATGGAAAAGTGGGGGTCGGTGCACTGTTCGTCAAAGTCAGTATGGATGGGGCTCCCTATTTAAGGAAAGTAGACTTGAATAATTACTCCACATATCCAGAATTATCTTCTGCTCTAGAGAAGATGTTCAGCTGTTTTACTATAAGTCAATGTGGATCTCATGGAATTCTGGGCAGGGAAATGCTGAATGAAACCAAGCTGAAGGACCTTCTTCATGGATCAGAATATGTTCTTACATATGAGGACAAAGATGGCGATTGGATGCTTGTGGGTGATGTTCCCTGGGATCTTGGGAAGGAAGCTAGGAAGCACTAA 1032 0.4457 MSPPLLGIGEEEGKSNVTLLVSSSTTMESVCLKTLELKERNYMGLSDCSSVDSSVPSFSEETKSNLNLKATELTLGLPGSQSSERDSDLCLRSSTQFDEKALFPLCPLADDHHSSTKTAVLGNKRGFSDAMNGFSEGKFLVDSEANPILSPRPASNLGLNPGSTLEKAGALQNKMKEAATTKMGLDRPHSANETRPSIHCSANNNNSAPATKAQVVGWPPIRSFRKNSLATNSKNNEEVDGKVGVGALFVKVSMDGAPYLRKVDLNNYSTYPELSSALEKMFSCFTISQCGSHGILGREMLNETKLKDLLHGSEYVLTYEDKDGDWMLVGDVPWDLGKEARKH* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g02417 343 ProSiteProfiles PB1 domain profile. 247 343 IPR000270 GO:0005515
Phac9g02417 343 SUPERFAMILY CAD & PB1 domains 246 338 - -
Phac9g02417 343 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 66 335 IPR003311 GO:0005634|GO:0006355
Phac9g02417 343 Gene3D - 242 342 - -
Phac9g02417 343 Pfam AUX/IAA family 71 336 IPR033389 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g02417 Phac-Chr9 22949282 22953843 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g02417 168 342 B3 DNA Binding Superfamily AT2G46530 28.962 2.12e-06 47.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Phac9g02417 AUX_IAA 3.9e-74 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g02417 K14484 - gmx:100783314 536.569