Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g02415 ATGGAGCACTGTGACCAGGATTTCTTGGAGGAATTGATGACTCTGAGAAGAGAAACATGGGACACCAATCCAAGTACAGAAGAAAACCAGTTCTTCTGTAATGGCTGGAGTAGTTTTGACTGTTTTGATCAAAACTCTCTACCTTACCTCCCGAACTCTTCTTCTGCTCAACAAGTTCCTCAAAGCTACAACGAATACTACCCTTTCAATGAAATCTATGGCTCTTTACTCGATGAAACCTCACCACAGATTATCGATTCATACTATAGTACCCTTCATACTCCACTCAATACCCTTGGTCAAGAGGATTATCCATTGTCCATTATGGAGGAAGAGGACCCCGGTATGCTTGGGGAAGAGCTTAAGAATTTGGAGCTGCAAGCCGCATGCAAAGCGGAGCCATCCCAATCCTCTGAAATGCCAGTTTTCAACATGGGAACGGGTCTGGAAAGAAAGAATCGGTCAAAGAAGCTTCAGGGACAACCCTCCAAGAATCTAATGGCGGAGAGGAGAAGAAGAAAGAGATTAAATGACAGGCTCTCAATGCTGAGAGCAATTGTCCCCAAGATAAGTAAGATGGATAGAACATCTATACTTGGAGACACTATTGATTACATGAAAGAGCTTCTGGAGAAGATCAACAATCTTCAACAAGAAGGAGAACTAGATTCTAAAATGGCTGCCATTTTCAAAGATGTAAAGCCAAATGAAATCCTAGTGAGAAATTCACCCAAGTTTGAAGTGGAGAGGAGTGTGGACACACGGGTGGAAATTTGCTGTGCAGGAAAGCCAGGATTGTTACAATCAACAGTAAACACCCTGGAGGCGTTAGGCCTTGAGATCCAACAATGTGTTATTAGCTGTTTCAATGATTTCACAATGCAAGCTTCTTGCTCAGAGGAATCGGAACAAAGGGCAATGCTGAGTTCTGAAGATATAAAGCAAGCGTTGTATAGAAGTGCAGGGTATGGAGGAAGGTGTTTGTGA 987 0.4286 MEHCDQDFLEELMTLRRETWDTNPSTEENQFFCNGWSSFDCFDQNSLPYLPNSSSAQQVPQSYNEYYPFNEIYGSLLDETSPQIIDSYYSTLHTPLNTLGQEDYPLSIMEEEDPGMLGEELKNLELQAACKAEPSQSSEMPVFNMGTGLERKNRSKKLQGQPSKNLMAERRRRKRLNDRLSMLRAIVPKISKMDRTSILGDTIDYMKELLEKINNLQQEGELDSKMAAIFKDVKPNEILVRNSPKFEVERSVDTRVEICCAGKPGLLQSTVNTLEALGLEIQQCVISCFNDFTMQASCSEESEQRAMLSSEDIKQALYRSAGYGGRCL* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g02415 328 CDD ACT_UUR-ACR-like 254 317 - -
Phac9g02415 328 SMART finulus 166 215 IPR011598 GO:0046983
Phac9g02415 328 Pfam Helix-loop-helix DNA-binding domain 166 209 IPR011598 GO:0046983
Phac9g02415 328 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 57 322 - -
Phac9g02415 328 Gene3D - 168 241 IPR036638 GO:0046983
Phac9g02415 328 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 164 221 IPR036638 GO:0046983
Phac9g02415 328 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 160 209 IPR011598 GO:0046983
Phac9g02415 328 Coils Coil 199 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g02415 Phac-Chr9 22929240 22931481 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g02415 151 328 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 68.889 1.48e-73 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Phac9g02415 HLH 1.4e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g02415 - - gmx:100784380 568.926
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac9g02415 9 22929240 22931481 Phac9g02415 9 22929240 22931481 ECH