Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g02393 ATGGGCTTCACTAATCACTTCCTGTTCTTGATGATGCTGCAATTCCTCGTGGCTCTGGGAGCTGATACCAAACCAGGAGTACGATTGGATATTCAAGATAAACATGTGATAATGGATAATGGCATAGTCCAGGTCAACTTATCCAATCCTGAAGGGATTGTCACGGGAATTCAATATAATGGCATCGACAATTTGCTCGAAGTTCTTAACGAAGAATACGACAGAGGGTACTGGGATATTGTATGGGACCAAGGTGGAGAAAATAGAACAAAAAAAGGAGCAAAGGGAAAGGGTAGATTTGACAGAATGGAAGCCACAAATTTAACGGTGATAGTGGAAAACGAGGAACAAGTAGAGCTATCTTTCACCAGAACATGGAATGTCTCTTTTGTAGGGAAACTTCCACCACTCAATATTGACAAAAGGTTTATAATGCTTCGTGGTTCTTCTGGGTTCTACACCTATGCCATTTACGAGCATTTGAAGGAATGGCCAGCTTTCGATCTCGACAATACTAGGATCGCATTCAAGCCTAGGAAAGAGAAGTTCCATTACATGTCTGTAGCAGACAACAGACAAAGATTTATGCCTCTGCCCGATGACCGAATACCCCCAAGAGGTCAAGTTCTTGCCTACCCTGAGGCTGTGCGTCTTGTTGACCCCGTGGAGCCTGAATTCAAAGGCGAGGTGGATGATAAATATCAGTATTCGTGCGAGAGTCGATACAATAAAGTTCACGGCTGGATGAGCATTGATCCATTGAATTCCACTGGATTCTGGCTAATTACTCCAAGCTATGAGTTCCGATCTGCTGGACCCCTCAAGCAATATCTTACTTCTCATGTTGGCCCCACCACACTCTCTGTATTTCATAGCACGCATTATTCAGGGACGGATCTGATAATGCAATTTGGACCTAATGAGCCGTGGAAGAAAGTCTATGGCCCCATATTTATATACCTCAATTCTCAATCTAACGGGGTTAGCCCAATCAAACTCTGGGAGGACGCCAAACAACAGATGGTCAATGAAGTTGAAAGCTGGCCCTATACTTTTCCAGCTTCCAAGGACTTTCTCTCATCTGAGGAACGAGGTAAAGTCGAAGGTAGATTGCTTGTCCGAGACAGGTAG 1131 0.4403 MGFTNHFLFLMMLQFLVALGADTKPGVRLDIQDKHVIMDNGIVQVNLSNPEGIVTGIQYNGIDNLLEVLNEEYDRGYWDIVWDQGGENRTKKGAKGKGRFDRMEATNLTVIVENEEQVELSFTRTWNVSFVGKLPPLNIDKRFIMLRGSSGFYTYAIYEHLKEWPAFDLDNTRIAFKPRKEKFHYMSVADNRQRFMPLPDDRIPPRGQVLAYPEAVRLVDPVEPEFKGEVDDKYQYSCESRYNKVHGWMSIDPLNSTGFWLITPSYEFRSAGPLKQYLTSHVGPTTLSVFHSTHYSGTDLIMQFGPNEPWKKVYGPIFIYLNSQSNGVSPIKLWEDAKQQMVNEVESWPYTFPASKDFLSSEERGKVEGRLLVRDR* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g02393 376 Gene3D - 29 304 IPR014718 GO:0030246
Phac9g02393 376 Pfam Rhamnogalacturonate lyase family 26 230 IPR010325 -
Phac9g02393 376 CDD RGL4_N 32 325 - -
Phac9g02393 376 PANTHER RHAMNOGALACTURONATE LYASE FAMILY PROTEIN 32 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g02393 Phac-Chr9 22818220 22822895 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g02393 27 376 Polysaccharide Lyase AT1G09890 64.023 1.04e-157 455
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g02393 K18195 - gmx:100786488 705.671