Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g02363 ATGGAATTTCACCACCACCACCAAGAGGAGGAGGAGGAGGAGGAGGAAGAAGAGGAGGAGGAGGAAGAAGAGGAAATGGGATTCTCGGTGGCGGCGCCGGGTTACGACTCCTTCGGAAACGCGGCCGCCAGGTCTAAAATGACCTCCGCTGAGGGACTTCCGGCCACCGTCAACTCTGGTCGCAAAGGCGGCTCCACGGGAACGGTCAGATACAGAGAATGTCAGAAGAATCATGCCGTCAGCATCGGCGGCCACGCCGTCGATGGATGCTGCGAGTTCTTGGCCGCCGGAGAGGAAGGCACGTTGGAGGCCGTAATTTGCGCCGCATGTAACTGCCACCGCAATTTTCACCGCAAGGAGATCGACGGCGAAATCAGCCCTTACCAGCTGCGCTCGCAGCCGCAACCGCAACCGCTGCATCCTCAGTATCACCACCAATTCTCCCCTTACTACCACCGCGGACCACCACCTTCTTCCGCGGGATACCTCCACCACCAGCACCTTTTAACCTCTCCTGTGTCGCAGCATCGGCCTTTGGCGCTACCACCGCTGGCTTCGGGAGGAGTGTTCAGTAGAGAAGAGGAGGACATGTCAAACCCCAGCTCGAGCGGCGGCGGTTTTGGTGGTGGTAGCGGCAGTGGAACGAAGAAGAGGTTTAGGACAAAATTCACGCAAGAGCAGAAGGATAAGATGCTGGCATTTGCGGAGAAGTTAGGATGGAGAATTCAGAAGCATGACGAAGCTGCTGTGGAACAATTCTGCGCTGAAACTTGTGTGAAGAGACATGTGCTCAAGGTCTGGATGCACAATAACAAACACACTCTCGCTAATTCTGAGCAACGTTCAGCTGGGAATGGATCGAATCACTTGAACAGCTCCACCATAATTGCGAATTCAGAACTCTCTCCTAAGGGAGATTAA 921 0.5505 MEFHHHHQEEEEEEEEEEEEEEEEEMGFSVAAPGYDSFGNAAARSKMTSAEGLPATVNSGRKGGSTGTVRYRECQKNHAVSIGGHAVDGCCEFLAAGEEGTLEAVICAACNCHRNFHRKEIDGEISPYQLRSQPQPQPLHPQYHHQFSPYYHRGPPPSSAGYLHHQHLLTSPVSQHRPLALPPLASGGVFSREEEDMSNPSSSGGGFGGGSGSGTKKRFRTKFTQEQKDKMLAFAEKLGWRIQKHDEAAVEQFCAETCVKRHVLKVWMHNNKHTLANSEQRSAGNGSNHLNSSTIIANSELSPKGD* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g02363 306 Coils Coil 3 27 - -
Phac9g02363 306 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 70 121 IPR006456 -
Phac9g02363 306 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 71 120 IPR006456 -
Phac9g02363 306 NCBIfam homeobox domain, ZF-HD class 216 272 IPR006455 -
Phac9g02363 306 MobiDBLite consensus disorder prediction 276 306 - -
Phac9g02363 306 MobiDBLite consensus disorder prediction 1 66 - -
Phac9g02363 306 MobiDBLite consensus disorder prediction 190 217 - -
Phac9g02363 306 Pfam ZF-HD protein dimerisation region 69 121 IPR006456 -
Phac9g02363 306 MobiDBLite consensus disorder prediction 51 65 - -
Phac9g02363 306 MobiDBLite consensus disorder prediction 11 27 - -
Phac9g02363 306 Gene3D - 202 279 - -
Phac9g02363 306 MobiDBLite consensus disorder prediction 276 300 - -
Phac9g02363 306 SUPERFAMILY Homeodomain-like 202 274 IPR009057 -
Phac9g02363 306 MobiDBLite consensus disorder prediction 195 209 - -
Phac9g02363 306 FunFam Zinc-finger homeodomain protein 2 209 277 - -
Phac9g02363 306 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 26 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g02363 Phac-Chr9 22548675 22552106 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g02363 20 275 ZF-HD Transcription Factor Family AT4G24660 50.000 3.39e-69 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Phac9g02363 ZF-HD_dimer 2.9e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g02363 - - pvu:PHAVU_009G037900g 552.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac9g02363 9 22548675 22552106 Phac9g02363 9 22548675 22552106 ECH
Phac8g02332 8 32285384 32289135 Phac9g02363 9 22548675 22552106 PCT