Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g02350 ATGTTGTGCTCATCGCGTAACCTTGGACTTCATTTCACTTCAATTAGACTGCCTCGCGACGTCAGGCTGTACAGTAATCATGGAAGTTGTTGTTTTTGTCAGAAGCGCGTGCATGGGGATGGATTATGTTTTGTTGCCATTAGTCTTTTGCCACATGGTTTGTTGGGAGGTGGCGTACGTACCATCAGGAGGAGTTTGGCGAGGAGAGCGATTCCGACAACGACGACCATGGACACGGTGGCAATGTCAAGGTCATATAATGCTATAGCGGGAAAACCAATTGCGATTCAATTCATCCCCGCCCTTGGTATTATTGGGTTTGCTGTTTTTGGTCTTGAGCCTCTTGTGCGACTGAGCAGGAAACTGTTTCTCCAAGAAAGTACTGATAGAAGTTGGAAGAAAAGTAGTTCACGTTATATTTTGACATCTTATTTTCGGCCCATGCTGCTGTGGACTGGAGTAATGCTCATATGCAGGGATTTAGATCTACTAGTCCTACCATCAGAAACTAGTCAGGCTATCAAGCAACGGCTGCTGAGTTTCGTGAGATCGTTGTCAACTGTGCTTACAATTGCTTACTGTTCTTCAAGCTTAATTCAACAAGCACAAAAATTTTGTATGGAGGCAAATGGCTCCAGTGATGAAAGAAATATGAGCATTGACTTTACTGGGAAAGCTGTATATACTGCAATTTGGGTTGCTGCTGTGTCATTGTTCATGGAGTTGCTGGGTATCTCCACACAGAAGTGGTTGACTGCTGGTGGTTTGGGCACAGTCTTGATTTCCCTTGCAGGTCGTGAGATATTTACAAACTTCCTTTCGAGTATGATGATTCATGCAACTCGGCCATTTGTTGTGAATGAGCGGATTCAAACAAAAATTAAAGGATATGAGGTTACCGGTAAAGTTGAGCATGTAGGCTGGTGGTCACCAACAATAATTAGAGGTTCTGATTGTGAAGCAATTCATATTCCTAATCACAATTTGAGTGTAAATGTTGTGAGGAATCTTAGTAAGAAATCTCATTGGCGTATAAAGACTCGTCTGGCTATCAGTCACTTGGATGTTAACAAGATTAATAGTATAATAGCTGATATGCGCAAGGTTTTGGCTAAAAATCCCCAAGTAGAGCAGAGAAAATTGCACAGAAGGGTTTTTCTAGAGAACATTGATCCAGAAAATCAGGCTCTTATGATATTGGTATCCTGCTTTGTTAAAACTTCACGTTCTGAAGAGTACCTGCGTGTAAAGGAGGCAATCCTCTTGGATCTTCTCAGAGTTATAAGTCATCATCGAGCTCAGCTAGCGACACCCATCCGCACAGTTCAGAAGATGTGCAGTGATACTGATTTCGATATTGATCCATTTGATGACACCATTTCCACTCGTTCCAGATCAAAGAAAAACCGTCCTTTCACACTGATAGATCCACCTTATAAAGTTAAGTCTTCAACTCCTTCAACCATAACAAATGAGGACAGAGATGGTAAGATGGATGAAACCTTGCCATCTGACATCAAAGTAGACTGTGACGAATTTTCTGTTACAGCAAGTTCCATCCAGAAGACCCCCAAATCCCAAAAGCCCAAAAAGGAAAGATCAGGAAGCACTGGAAAGGAAACAACACCATCAAAGCTAGATGTTTCCACGTCTTCATCATCATCATCATCACTTAGTCGTTCTTTGGAAGAGAATATTATTCTTGATATTGCTGTGATGGGCTCAGAGAGAACTCTTGCAGTTGATGAAGAATTGGTTAATTCTATCCCTGCAGAGTCACAAGAAGTTGCAGCCCATCAGAATGGGAGTGAATCTACTATTTGCAAGGATAAGAAGGATGGTGAGATGTCTTCATTGCCTACTACTAAACAAAAGGATTAA 1881 0.4173 MLCSSRNLGLHFTSIRLPRDVRLYSNHGSCCFCQKRVHGDGLCFVAISLLPHGLLGGGVRTIRRSLARRAIPTTTTMDTVAMSRSYNAIAGKPIAIQFIPALGIIGFAVFGLEPLVRLSRKLFLQESTDRSWKKSSSRYILTSYFRPMLLWTGVMLICRDLDLLVLPSETSQAIKQRLLSFVRSLSTVLTIAYCSSSLIQQAQKFCMEANGSSDERNMSIDFTGKAVYTAIWVAAVSLFMELLGISTQKWLTAGGLGTVLISLAGREIFTNFLSSMMIHATRPFVVNERIQTKIKGYEVTGKVEHVGWWSPTIIRGSDCEAIHIPNHNLSVNVVRNLSKKSHWRIKTRLAISHLDVNKINSIIADMRKVLAKNPQVEQRKLHRRVFLENIDPENQALMILVSCFVKTSRSEEYLRVKEAILLDLLRVISHHRAQLATPIRTVQKMCSDTDFDIDPFDDTISTRSRSKKNRPFTLIDPPYKVKSSTPSTITNEDRDGKMDETLPSDIKVDCDEFSVTASSIQKTPKSQKPKKERSGSTGKETTPSKLDVSTSSSSSSSLSRSLEENIILDIAVMGSERTLAVDEELVNSIPAESQEVAAHQNGSESTICKDKKDGEMSSLPTTKQKD* 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g02350 626 MobiDBLite consensus disorder prediction 517 560 - -
Phac9g02350 626 Gene3D - 180 282 - -
Phac9g02350 626 MobiDBLite consensus disorder prediction 457 503 - -
Phac9g02350 626 Pfam Mechanosensitive ion channel 225 431 IPR006685 GO:0016020|GO:0055085
Phac9g02350 626 SUPERFAMILY Sm-like ribonucleoproteins 268 338 IPR010920 -
Phac9g02350 626 MobiDBLite consensus disorder prediction 592 626 - -
Phac9g02350 626 MobiDBLite consensus disorder prediction 605 626 - -
Phac9g02350 626 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 70 618 IPR045042 -
Phac9g02350 626 MobiDBLite consensus disorder prediction 539 560 - -
Phac9g02350 626 Gene3D - 283 336 IPR023408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g02350 Phac-Chr9 22445799 22468569 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g02350 65 622 Mechanosensitive Ion Channel Family AT5G10490 53.691 0.0 599
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g02350 K22047 - gmx:100797302 963.37