Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g02349 ATGGTCTTTCCAGGTTCAACGCAATTGTTTCTAGACGTTGGGCTCAACAATAATATTGGATTCTGTAATTTTCATCCTCATAATCGGAGGGAGGTTGGTCGACTACATTTGGTCACCATAAATCTTTCACCGGGTAGCTTGAAGCAAGACTCTTCGGCTCTCCATCTTTTAAGTAGACTACATGCTCCCATAAGGCACGTGCCTTCCAAATGTAAAGTTTTCATATGTCGGTCTGTCTTAGTACCAGGTGGAGGGAGTGGAACTCCTTTCATGAAATCTGCCGGTGTTATTTTAACAAGGTCATATGATGCTTTACAAGGAAACCCTGTTTTGCTTCGATTGATCCCAGCCCTTGGTATCATTGCCTTTGCTGTTTGCGGTCTTGAACCACTCCTTCGAATCAGCAGGGTTTTGTTCCTTCAAAGGACTGACAGCAGTTGGAAGAAAAGTAGTTCGCGGTATGCTATGACATCCTATTTTCAGCCATTGTTGTTATGGACTGGGGCAATGCTCATATGCAGGGCATTAGATCCAGTAGTCCTACCATCTACGTCCAGCCAGGTTGTGAAGCAGCGGCTTCTGAATTTTGTGAGATCTTTGTCAACTGTGATTTCATTTGCTTACTGTTTATCAAGTTTAATTCAACAAGGACAAAAATTCTTTCTGGAGGCAAATGACTCCAGTGGTGCTAGAAATGTGGGCTTTGATTTTGCTGGGAAGGCAGTATATAGTGCTGTTTGGGTTGCTGCTGTGTCGTTGTTCATGGAGCTTTTAGGTTTCTCCACACAGAAGTGGTTAACTGCCGGTGGTTTGGGCACTGTATTGCTCACTCTAGCAGGTCGTGAGATATTTACAAACTTTCTGTCAAGCATAATGATCCATGCAACTCGGCCATTTATTGTGAATGAGTGGATTCAAACAAAAATTGAAGGATACGAGGTTTCTGGCACAGTTGAGCATGTAGGGTGGTGGTCACCAACCATTGTTAGAGGCGATGACCGCGAGGCAGTTCATATTCCTAACCACAAGTTTACTGTAAATGTTGTGAGAAATCTGACTCAAAAATCTCATTGGCGTATCAAGAGTTACATTGCTATCAGTCACTTGGATGTTAACAAAATTAATAATATTGTAGCTGATATGCGCAAGGTTTTGTCCAAAAATCCTCAAGTAGAACAGCAAAAATTGCATAGAAGGGTCTTTTTGGAGAATGTTAATCCTGAAAATCAGGCTCTTATGATATTAATATCTTGCTTTGTGAAAACTTCTCATTTTGAAGAGTACCTCTGTGTTAAGGAGGCAATCCTTTTGGATCTTCTCAGAGTTGTCAGTCATCATCGAGCCAGACTAGCCACTCCCATCCGCACAGTTCAGAAAATATATAGTGACGCTGACTCGGAAAATATACCTTTTGGTGACACAATTTTCACTCGATCTAGAGCTGCAAATCGCCCATTCCTACTGATAGAACCACCATATAAAGTTAATGGTGAAGATAAAGTTAAACCCTCAACTCGTGCAACTCGCACAAATGAGGAAAAAGATTCCAGGATTGATGAAACCATGGCATCTGACTCCAAAGTAGACGAGAATTTTGGATCAACATCTACTCCCTCAACCGATGTAAACAACTCTAGGGATAAATCCAAGTCATTTTCTGAATCACAAGCTAAAAGGGAAAATGCAGTAGATGAACGAAAGGGAAGTACAGTTCCTCTATCTAGAAACCTGGCTCAAAGTGCTGTGCCTGAAACCTCACCTGTTGCAACCCATGAGACCACTTCTGCTACTTCTTCACAGTCAAAGCAAGATGAAGAGAAATCTTCTGTCTCTTCGTCATCAGTTAGACCTTCCTTGGAAGAGAACATTCTGCTTGGGGTTGCCTTAGAAGGCTCAAAACGAACTCTTCCAATCGAAGAAGAAATGACTCCATCTGCTATGCCCCCGGACTCACAAGAATTTGCTGTCCAACGGAACGGTGGTGGACCTCCTGCTAGCAAGGATAAGAAGGATGGTCAGTCTTCATTTCCGACTGGTAAACAGAATGACTAG 2052 0.424 MVFPGSTQLFLDVGLNNNIGFCNFHPHNRREVGRLHLVTINLSPGSLKQDSSALHLLSRLHAPIRHVPSKCKVFICRSVLVPGGGSGTPFMKSAGVILTRSYDALQGNPVLLRLIPALGIIAFAVCGLEPLLRISRVLFLQRTDSSWKKSSSRYAMTSYFQPLLLWTGAMLICRALDPVVLPSTSSQVVKQRLLNFVRSLSTVISFAYCLSSLIQQGQKFFLEANDSSGARNVGFDFAGKAVYSAVWVAAVSLFMELLGFSTQKWLTAGGLGTVLLTLAGREIFTNFLSSIMIHATRPFIVNEWIQTKIEGYEVSGTVEHVGWWSPTIVRGDDREAVHIPNHKFTVNVVRNLTQKSHWRIKSYIAISHLDVNKINNIVADMRKVLSKNPQVEQQKLHRRVFLENVNPENQALMILISCFVKTSHFEEYLCVKEAILLDLLRVVSHHRARLATPIRTVQKIYSDADSENIPFGDTIFTRSRAANRPFLLIEPPYKVNGEDKVKPSTRATRTNEEKDSRIDETMASDSKVDENFGSTSTPSTDVNNSRDKSKSFSESQAKRENAVDERKGSTVPLSRNLAQSAVPETSPVATHETTSATSSQSKQDEEKSSVSSSSVRPSLEENILLGVALEGSKRTLPIEEEMTPSAMPPDSQEFAVQRNGGGPPASKDKKDGQSSFPTGKQND* 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g02349 683 MobiDBLite consensus disorder prediction 572 619 - -
Phac9g02349 683 MobiDBLite consensus disorder prediction 495 683 - -
Phac9g02349 683 SUPERFAMILY Sm-like ribonucleoproteins 283 353 IPR010920 -
Phac9g02349 683 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 5 674 IPR045042 -
Phac9g02349 683 Gene3D - 298 351 IPR023408 -
Phac9g02349 683 MobiDBLite consensus disorder prediction 527 546 - -
Phac9g02349 683 MobiDBLite consensus disorder prediction 547 566 - -
Phac9g02349 683 MobiDBLite consensus disorder prediction 495 526 - -
Phac9g02349 683 Pfam Mechanosensitive ion channel 240 447 IPR006685 GO:0016020|GO:0055085
Phac9g02349 683 Gene3D - 193 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g02349 Phac-Chr9 22437599 22443361 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g02349 13 683 Mechanosensitive Ion Channel Family AT5G10490 57.647 0.0 736
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g02349 K22047 - gmx:100777815 1151.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac9g02349 9 22437599 22443361 Phac9g02349 9 22437599 22443361 ECH