Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g02342 ATGTCAGAGAAGAAGAACAAAGTGTCTTATACGGAAAAAGATGCTGTGGCGCTGATGCAGAGGTACGACCCAACTACGGTGTTCACCTTGCTTCAAGAAGTTGCGCATTACGCTAAGCCAAAGATTGACTGGAACGAGTTGGTGAAGAAAAGTGCGACTGGGATTTCTAATGTTAGGGAATATCAAATGCTGTGGCGGCATTTGGCCTATCGGCATTCTTTGCCGGAAGATTTTGAAGTTGGGGCTGAACCTTTGGATGATGACAGTGACTTAGAGTGTGAGCTAGAAGCATTACCTCCTGTAAGTGTGGAATCTGCATCAGAGGCGGCTGCATGTGTGAAGGTAATGATTGCTTCTCGCACACTAAGTGAATCTGCGCCTAGTAGCTCAACAATCGAGGCTCCATTGACTATAAATATTCCAGTTTGCCATTCATCTAGAACTCGTATTGAAAGTTCACAACCCTCTAATTTAATGCAAGGGACAAACATTGTTTTTCCAGTCACTGTTCAGAGACAAACATTGCCAACGCACCCTGCACCATCAACAGATGGTATAGAATCTAAGGGATTAGTTGGTGGTAATCTAGCCTCCAAAAGAAAACGAAAAACATGGTCAGAGGAAGAGGACATACAACTACGAGCTGCTGTGCAGAGATGGGGCGAAGGGAATTGGGCAACCATGGCAAAAGGAGACAACTTTCCTATTAAGAGAAGTCCTACACAGTTAGCACAGAGGTGGAGCATTTTACGAAAGAAAGATGGGACTGTCAATTCTGGAACCATATCAACCAGCACACAATATACTACTGCTGAACAGCTGGCAACCCGACACTCTTTATCTTTAGCCCTTGATATGCCATTCAAAAAGTTAACTGCTCCTGGAGTGTCGGATCCTGTTAAAACATCCATATCAGTTAAAAATCAAATGCAGAATAGAAATATGGTGGAGAAGGTTGTCACTAGTTTTGTACCACCTCAACAGTCATCTCAGCACTCTTCTTTGTTGGGATCTTCTGATCCCAATGTAAAACCTAAATTAGTAGATGAAAAACTAGTCCTGAAGGGTAATATAATTTCAAATCCTGTGCTAAAATCTACTACAGCTGCATCTGGGACGCGAACCGATCCTCCTTCAAATACTGTATCACAGTTTAAAATGGCTCCAGTAAAACACAATGTAGACGCCAAGCCTGCAGTGAGTTCTTTGACAAAACCATCCATCTCTGCCAATTTGCCTTCTAATCTCAAGAATAAACCGGTTACTCCTTTGGCTGATAAAGTTACATTGAAGCAAGACGCAAATTCCACGAAAGAGTTTAGAGCTTTTGATCCCACCTCCGCACCAAAAGAGACAACACAAAAGGAACAGCCTAAAGTTACTATTGGAAGCCAGATCAATAACAATTTAGATAAGGGAAGATTAGATACAGGTCAAGGGAAGATCATGCCAATTAGTAGTGGGGAGGCAGGTTTGAAAGATAAAGCAAATCCGGTAACAGATGAAAAAAGTGCTACTAAAGCAAATGCTGTGGTGTATGAAGACGAAGGAAGTGTTAAGAATGCTAGTGAGAATAGCAAACTTGACAAGGAAAGCCTAACTTTTAATGAAGACAAGAAACATTCAATTAATGAAAGTTCAAACAATCAAAACATAAATGACAAAAATGTAAATTTGTCCCTACAAGATGAAGACAGCCAAAGTGCCAAGGTGGTAAAAACTGATGGAGGATGTTGA 1737 0.4134 MSEKKNKVSYTEKDAVALMQRYDPTTVFTLLQEVAHYAKPKIDWNELVKKSATGISNVREYQMLWRHLAYRHSLPEDFEVGAEPLDDDSDLECELEALPPVSVESASEAAACVKVMIASRTLSESAPSSSTIEAPLTINIPVCHSSRTRIESSQPSNLMQGTNIVFPVTVQRQTLPTHPAPSTDGIESKGLVGGNLASKRKRKTWSEEEDIQLRAAVQRWGEGNWATMAKGDNFPIKRSPTQLAQRWSILRKKDGTVNSGTISTSTQYTTAEQLATRHSLSLALDMPFKKLTAPGVSDPVKTSISVKNQMQNRNMVEKVVTSFVPPQQSSQHSSLLGSSDPNVKPKLVDEKLVLKGNIISNPVLKSTTAASGTRTDPPSNTVSQFKMAPVKHNVDAKPAVSSLTKPSISANLPSNLKNKPVTPLADKVTLKQDANSTKEFRAFDPTSAPKETTQKEQPKVTIGSQINNNLDKGRLDTGQGKIMPISSGEAGLKDKANPVTDEKSATKANAVVYEDEGSVKNASENSKLDKESLTFNEDKKHSINESSNNQNINDKNVNLSLQDEDSQSAKVVKTDGGC* 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g02342 578 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 197 255 IPR017930 -
Phac9g02342 578 MobiDBLite consensus disorder prediction 545 567 - -
Phac9g02342 578 ProSiteProfiles Myb-like domain profile. 197 251 IPR001005 -
Phac9g02342 578 SMART sant 201 253 IPR001005 -
Phac9g02342 578 SUPERFAMILY Homeodomain-like 200 253 IPR009057 -
Phac9g02342 578 MobiDBLite consensus disorder prediction 396 415 - -
Phac9g02342 578 MobiDBLite consensus disorder prediction 520 544 - -
Phac9g02342 578 CDD SANT_TRF 203 252 - -
Phac9g02342 578 MobiDBLite consensus disorder prediction 439 474 - -
Phac9g02342 578 MobiDBLite consensus disorder prediction 400 415 - -
Phac9g02342 578 Gene3D - 196 256 - -
Phac9g02342 578 MobiDBLite consensus disorder prediction 423 578 - -
Phac9g02342 578 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 2 560 - -
Phac9g02342 578 Pfam Myb-like DNA-binding domain 202 247 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g02342 Phac-Chr9 22341551 22350150 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Phac9g02342 Myb_DNA-binding 1.9e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g02342 - - gmx:100805773 730.709
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac9g02342 9 22341551 22350150 Phac9g02342 9 22341551 22350150 ECH
Phac8g02370 8 33045222 33055071 Phac9g02342 9 22341551 22350150 PCT