Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g02331 ATGCATAGGAAGAATGGGCAGTTTGCATCCTTGAAAGAAAGTCCAGGTTCATCTAATTGGGATGCACGAAGTTCTGCTCAAGATGGCACTTTTCATTCTGAATCTGTACGTAGATGTCACCATTGTGGTGTCACTGAAAATAATACTCCTGCAATGCGTCGGGGGCCAGCTGGACCAAGGACTTTATGCAATGCATGCGGCCTTATGTGGGCTAACAAGGTTTGTCATTGTGCTAAGAAGTTTGGTTGTGATCAAATGCTTGGTGTGAACTTGAACATCTGA 282 0.4433 MHRKNGQFASLKESPGSSNWDARSSAQDGTFHSESVRRCHHCGVTENNTPAMRRGPAGPRTLCNACGLMWANKVCHCAKKFGCDQMLGVNLNI* 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g02331 93 CDD ZnF_GATA 38 73 IPR000679 GO:0006355|GO:0043565
Phac9g02331 93 Pfam GATA zinc finger 39 73 IPR000679 GO:0006355|GO:0043565
Phac9g02331 93 ProSitePatterns GATA-type zinc finger domain. 39 66 IPR000679 GO:0006355|GO:0043565
Phac9g02331 93 SMART GATA_3 33 85 IPR000679 GO:0006355|GO:0043565
Phac9g02331 93 MobiDBLite consensus disorder prediction 10 32 - -
Phac9g02331 93 Gene3D - 33 80 IPR013088 GO:0006355|GO:0008270
Phac9g02331 93 PANTHER GATA TRANSCRIPTION FACTOR 28 1 73 IPR045280 GO:0006355
Phac9g02331 93 MobiDBLite consensus disorder prediction 1 35 - -
Phac9g02331 93 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 33 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g02331 Phac-Chr9 22157340 22159646 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g02331 1 73 Tify Gene Family AT1G51600 51.899 3.44e-18 75.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Phac9g02331 GATA 5.7e-14 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g02331 - - vun:114164157 153.68