Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g02287 ATGGAAGCACAAGAGTTCTTCCAGAACACCTTCTATCCTCAATTCCCCTCCGACAACATACCTCCCTCTAACGCCAACGCCTCTGTCACTGACCACTTCACTGTTGAAGACTTCTTCGACTTCTCCAACAACGACGACCCTCCCCTCGCCGAGGCCACCACCTTCGACTCTCTCCCCACTGACCACTCTCCCACCTTAACCAACATCGACAGCACCACCAACAACTCCAATTTCCCACTCACTGACGGACATTTCTCCGGTGACCTCTCTGTCCCGTATGATGATCTTGCTGAATTGGAATGGCTGTCGAAATTCGCCGAGGAATCCTTTTCTAGCGAGGACTTACAGAAGCTGCAGCTGATATCCGGCGCCGGAGTGCAAAAGGATGCCACATCGGAAACACGTGACCCGAACCCAGCTTTATTCAACCCGCAAGTATCGGTTCGGGGAAAGGCGAGGAGTAAGAGGACTAGAGGGCCGCCATGCAATTGGACATCTCGTCTCGTTGTCCTTTCTCCAAACACCGTGTCGGAGTCTTTTCATTCAGACGGCGGAAAGAAGGTTGCCCCGCGGAGGAGGGATGTGAGCGAGGGCAGCAGTGAGGGTAGAAAGTGTCTGCATTGCGCGACGGACAAGACACCACAGTGGCGGACCGGCCCCATGGGTCCAAAAACACTTTGCAATGCATGCGGCGTGAGGTACAAGTCCGGCAGGCTGGTGCCCGAGTACAGGCCCGCCGCAAGCCCAACTTTTGTGCTGACAAAGCACTCAAACTCGCATCGGAAAGTGTTGGAGCTGCGACGGCAGAAGGAAATGGTGAGGGTCCAGCAGGAGCAGTTGCTCCATCTGCAGCATCAGCAAAACATGATGTTCGAAGTTCCATCCAACGGTGAGGATTACTTGATCCATCAGCAATGGGTCCCCAATTCACATACCTCATCTAATCTCCTCCTAGACTAG 960 0.5396 MEAQEFFQNTFYPQFPSDNIPPSNANASVTDHFTVEDFFDFSNNDDPPLAEATTFDSLPTDHSPTLTNIDSTTNNSNFPLTDGHFSGDLSVPYDDLAELEWLSKFAEESFSSEDLQKLQLISGAGVQKDATSETRDPNPALFNPQVSVRGKARSKRTRGPPCNWTSRLVVLSPNTVSESFHSDGGKKVAPRRRDVSEGSSEGRKCLHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFVLTKHSNSHRKVLELRRQKEMVRVQQEQLLHLQHQQNMMFEVPSNGEDYLIHQQWVPNSHTSSNLLLD* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g02287 319 MobiDBLite consensus disorder prediction 56 74 - -
Phac9g02287 319 MobiDBLite consensus disorder prediction 176 201 - -
Phac9g02287 319 Gene3D - 198 249 IPR013088 GO:0006355|GO:0008270
Phac9g02287 319 ProSitePatterns GATA-type zinc finger domain. 205 230 IPR000679 GO:0006355|GO:0043565
Phac9g02287 319 MobiDBLite consensus disorder prediction 1 27 - -
Phac9g02287 319 Pfam GATA zinc finger 205 238 IPR000679 GO:0006355|GO:0043565
Phac9g02287 319 MobiDBLite consensus disorder prediction 128 161 - -
Phac9g02287 319 SMART GATA_3 199 249 IPR000679 GO:0006355|GO:0043565
Phac9g02287 319 PANTHER GATA TRANSCRIPTION FACTOR 30 276 - -
Phac9g02287 319 CDD ZnF_GATA 204 251 IPR000679 GO:0006355|GO:0043565
Phac9g02287 319 PIRSF Txn_fac_GATA_plant 1 294 IPR016679 GO:0003677|GO:0005634|GO:0045893
Phac9g02287 319 FunFam GATA transcription factor 194 281 - -
Phac9g02287 319 MobiDBLite consensus disorder prediction 184 201 - -
Phac9g02287 319 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 201 263 - -
Phac9g02287 319 ProSiteProfiles GATA-type zinc finger domain profile. 199 235 IPR000679 GO:0006355|GO:0043565
Phac9g02287 319 MobiDBLite consensus disorder prediction 54 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g02287 Phac-Chr9 21857153 21859151 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g02287 30 309 C2C2-Gata Transcription Factor Family AT5G25830 49.689 2.01e-82 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Phac9g02287 GATA 2.8e-15 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g02287 - - gmx:100776588 468.003