Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g02283 ATGGCCAAAGGATCTTCAAAGACAAAATCCATTACATTTATATGCCTCTTCTTGTTCATGCTCTACTTCCATTCATCCCACGGAGATCCACAAGAGGTTGAGCTTTTATTATCCTTCAAAGCTTCCCTCGATGACCCGCTTCACTTTCTCTCCAACTGGGAAACTTCCTCTGCCACTATATGCAGGTGGCATGGCATCACCTGCGACAACAACGTTAACTCTTCCCACGTTAACGCTGTGGTGCTCTCGGGAAAAAACATGACAGGCGAGGTTTCCTCTATTTTTCAACTTCCATACGTCACAAAACTCGACCTTTCCAATAACCAGTTTGTTGGGGAAATCACTTTTAACTACTCTCTCAATTATCTGTCTCTACTTCGTTACCTTAACCTCAGCAGCAACAACCTCACAGGTTCTTTGCCTCAACCCTTGTTTTCCGTGCTTTTCTCAAACCTTGAAACTCTGGATCTCTCCAACAACATGTTTTCGGGGAACATACCTGACCAAATTGGATTGCTTTCCAGCCTAAGGTATCTTGATCTTGGAGGAAACGTTTTGGTAGGAAAGATTCCGAATTCCATCACCAACATGACCACTTTGCAATACCTTACGTTGGCTTCAAACCAGTTAGTGGATAAGATACCACAAGAAATTGGCCAAATGAAGAGCTTGAAGTGGATTTACTTGGGCTACAACAACCTTTCAGGTGAGATACCAAGTAGCATTGGAGAGTTACTCTCTTTGAATCATCTCGACCTTGTTTACAACAACCTCACTGGACCTATTCCTCATTCTCTCGGACACCTCACCGAGCTTCAATATCTCTTTCTCTATCAAAACAAACTGAGTGGTCCAATTCCCCAATCCATTTTCGAACTCAAAAAGCTCCTTTCACTCGATCTAAGTGATAACTCTCTTTCGGGTTTGATTTCTGAGCGTGTGGTTCAGCTCCAGAGGCTGGAGATTCTCCACCTTTTCTCAAACAACTTCACTGGGAAGATTCCAAAGGGTGTTGCATCTTTGCCTCGGCTCCAGGTTCTTCAGCTATGGTCAAATGGATTAACAGGTGAGATTCCTGAAGAGCTAGGAAAACATAGCAACCTCACTGTGTTAGACCTCTCCACCAACAACCTCGCAGGGAAGATTCCAGATAACATATGCCACTCAGGTACTCTTTTCAAGCTGATCCTCTTCTCCAACTATTTCGAAGGAGAAATCCCAAAGAGCTTAACCTCTTGCAGAAGCCTTCGCCGAGTTAGACTCCAAAACAACAAGTTCTCGGGGAAATTACCATCGGAGTTAACTACACTGCCTCAGGTATACTTCTTGGATATCTCTGGAAACCAACTTTCAGGAAGGATCGATGACCGAAAATGGGACATGCCATCGCTTCAAATGCTCAGTTTGGCCAACAACAACTTCTCAGGAGAAATCCCTAGCTCTTTCGGGACACAAATTCTCGAGGACTTGGACTTATCAAACAACCAATTCTCAGGTTCTATTCCACTAGGTTATAAAAGCCTGTCAGAGCTGGTGGAATTGAAGCTCAGCTATAACAAACTCTTTGGTAACATCCCAGAAGAAATTTGCTCGTGCAAGAAGCTCGTGGCCTTATATTTGAGTCACAACCAGCTCAGTGGTGAAATTCCGATGAAATTCTCCGAGATGCCGGTTCTAGGCCTTCTTGACCTGTCAGAAAACCAACTCTCCGGCGAGATTCCACAGGATTTGGGAAGCACCGAGTCTCTCGTTCAGATCAACATTTCACACAATCATTTTCGTGGAAGTTTACCTTCTACCGAGGCTTTCCTCGCCATCAACGCTAGTGCAGTCACCGGCAACAACCTTTGTGACCGTGATGGTGACTCTTCAAGCGGGTTGCCACTGTGTAAAAGAAGCAACCAGAACCCAACTTGGCTCCTCATCATGCTGTGTTTTCTACTAGCATTGGTTGCGTTCGCAGCAGCTTCTTTACTCGTCTTTTATATTCATAAGAGAAAGAGCTTCTCGGAAGTGCGAAAAGTGGAAAACGAAGACGGAACCTGGGAAGTGCAGTTTTTTTATTCCAAAGCAGCGAGGTTGATGAAGGTAGATCATGTTTTGTCTGCGGTTAAAGAGGGAACAGTTGTCTCCAAAGGAAGGAACTGGGTTTCCTACGAAGGGAAGTGCATGGAGAATGACATGCAGTTCATGGTGATAGAAATCAGTGACTTGAATTCTCTTTCGATGAGTACATGGGAAGAGACAGTGAAAGTTGGAAAGGTTCATCACCCCAATATCTTCAATCTTATTGGGACGTGTAGGTGTGGGAAGAAAGGGTACTTGGTGTACGAACACGAGGAGGGTAAGAAACTAAGCCAAATTGTGAACAGTCTGAATTGGAAACAGCGATGCAAAATTGCTGTTGGCGTTGCAAAAGCGATTAAATTCCTTCATTCTCGCGCTTCATCCATTGTTTTGGTGGGAGAGGTTGTACGGGAGATAGTTAGTGTCGACAGCAAAGGTGTCCCTCGCCTTAAGGTCACTCCTCCCATACTAACATGTTTGGATGTCAAGGGCATTACTTCTTCGCCCTACCTTGTCCAAGGTACTAAACTAAATCACTGTTTTACAGCTTACTAA 2622 0.4439 MAKGSSKTKSITFICLFLFMLYFHSSHGDPQEVELLLSFKASLDDPLHFLSNWETSSATICRWHGITCDNNVNSSHVNAVVLSGKNMTGEVSSIFQLPYVTKLDLSNNQFVGEITFNYSLNYLSLLRYLNLSSNNLTGSLPQPLFSVLFSNLETLDLSNNMFSGNIPDQIGLLSSLRYLDLGGNVLVGKIPNSITNMTTLQYLTLASNQLVDKIPQEIGQMKSLKWIYLGYNNLSGEIPSSIGELLSLNHLDLVYNNLTGPIPHSLGHLTELQYLFLYQNKLSGPIPQSIFELKKLLSLDLSDNSLSGLISERVVQLQRLEILHLFSNNFTGKIPKGVASLPRLQVLQLWSNGLTGEIPEELGKHSNLTVLDLSTNNLAGKIPDNICHSGTLFKLILFSNYFEGEIPKSLTSCRSLRRVRLQNNKFSGKLPSELTTLPQVYFLDISGNQLSGRIDDRKWDMPSLQMLSLANNNFSGEIPSSFGTQILEDLDLSNNQFSGSIPLGYKSLSELVELKLSYNKLFGNIPEEICSCKKLVALYLSHNQLSGEIPMKFSEMPVLGLLDLSENQLSGEIPQDLGSTESLVQINISHNHFRGSLPSTEAFLAINASAVTGNNLCDRDGDSSSGLPLCKRSNQNPTWLLIMLCFLLALVAFAAASLLVFYIHKRKSFSEVRKVENEDGTWEVQFFYSKAARLMKVDHVLSAVKEGTVVSKGRNWVSYEGKCMENDMQFMVIEISDLNSLSMSTWEETVKVGKVHHPNIFNLIGTCRCGKKGYLVYEHEEGKKLSQIVNSLNWKQRCKIAVGVAKAIKFLHSRASSIVLVGEVVREIVSVDSKGVPRLKVTPPILTCLDVKGITSSPYLVQGTKLNHCFTAY* 874
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g02283 873 SMART LRR_typ_2 508 532 IPR003591 -
Phac9g02283 873 SMART LRR_typ_2 149 173 IPR003591 -
Phac9g02283 873 SMART LRR_typ_2 461 485 IPR003591 -
Phac9g02283 873 SMART LRR_typ_2 341 365 IPR003591 -
Phac9g02283 873 SMART LRR_typ_2 269 293 IPR003591 -
Phac9g02283 873 SMART LRR_typ_2 366 389 IPR003591 -
Phac9g02283 873 SMART LRR_typ_2 197 221 IPR003591 -
Phac9g02283 873 SMART LRR_typ_2 556 580 IPR003591 -
Phac9g02283 873 SMART LRR_typ_2 123 147 IPR003591 -
Phac9g02283 873 FunFam Leucine-rich repeat receptor protein kinase EMS1 240 324 - -
Phac9g02283 873 SUPERFAMILY L domain-like 29 334 - -
Phac9g02283 873 Pfam Protein tyrosine and serine/threonine kinase 743 814 IPR001245 GO:0004672|GO:0006468
Phac9g02283 873 FunFam Probably inactive leucine-rich repeat receptor-like protein kinase 325 626 - -
Phac9g02283 873 Gene3D Ribonuclease Inhibitor 299 625 IPR032675 -
Phac9g02283 873 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 393 836 - -
Phac9g02283 873 ProSiteProfiles Protein kinase domain profile. 658 873 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g02283 873 Gene3D Transferase(Phosphotransferase) domain 1 685 835 - -
Phac9g02283 873 ProSiteProfiles Leucine-rich repeat profile. 151 173 IPR001611 GO:0005515
Phac9g02283 873 FunFam Probably inactive leucine-rich repeat receptor-like protein kinase 668 779 - -
Phac9g02283 873 Pfam Leucine rich repeat 150 210 IPR001611 GO:0005515
Phac9g02283 873 Pfam Leucine rich repeat 223 282 IPR001611 GO:0005515
Phac9g02283 873 Pfam Leucine rich repeat 487 545 IPR001611 GO:0005515
Phac9g02283 873 FunFam Probably inactive leucine-rich repeat receptor-like protein kinase 148 239 - -
Phac9g02283 873 Pfam Leucine rich repeat N-terminal domain 30 69 IPR013210 -
Phac9g02283 873 SUPERFAMILY L domain-like 302 598 - -
Phac9g02283 873 SUPERFAMILY Protein kinase-like (PK-like) 695 814 IPR011009 -
Phac9g02283 873 PRINTS Leucine-rich repeat signature 508 521 - -
Phac9g02283 873 PRINTS Leucine-rich repeat signature 296 309 - -
Phac9g02283 873 Gene3D Ribonuclease Inhibitor 29 188 IPR032675 -
Phac9g02283 873 Gene3D Ribonuclease Inhibitor 189 290 IPR032675 -
Phac9g02283 873 FunFam Probably inactive leucine-rich repeat receptor-like protein kinase 31 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g02283 Phac-Chr9 21804125 21808350 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g02283 13 838 Receptor kinase-like Gene Family AT2G25790 51.737 0.0 779
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Singleton Phac9g02283 PK_Tyr_Ser-Thr 1.2e-05 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g02283 - - gmx:100777118 1418.29