Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g02252 ATGTCCAAAATGCCCCTCTTCGTTTACTTTCATTTGTTTCTGTTATTCAGCATCTCTGTACCCTCCCGGGTAATTTCCGAAACTGAACAAACAATCCTACTCACACTCAAACGTCAACTGGGAGACCCGCCGTCGCTCCGATCATGGAAACCGTCTCCGTCGGCGCCGTGCGACTGGACGGAGATTGGCTGCGGCAGCGACGGCGCCGTCACGAATCTTCTCCTCTCGAACAAAGGCATCACCACCTCCAAGAGCCTCCCTTCCACAATCTGCAATCTCAAACACCTCCTCATGCTTGACCTCTCCTACAACTCCATTGCCGGCGAGTTTCCGACAACCTTGTACGAATGCTCCAACCTCCAGTACCTCGACCTGTCGCAGAACTACCTGGCCGGAGCGGTCCCTGCCGACGTGGACCGCCTCAAAACCCTCACTTACCTCAACCTCGGCGGCAACTCCTTCTCCGGAGAGATCCCGGCGGCGATCGGGAACCTGCCGGAACTGCAAACGCTGCATCTTTTCAAAAACAACTTCGAGGGAACCGTCCCGAAGGAAATCGGAAACTTGTCGAACCTCGAAGTCTTGGGTTTGGCTTATAATCTCAAACTCGCGCCGTGGAAGATCCCGTTGGAGTTTAGGAAATTAAGAAATTTGAGGTATCTGTGGATGACGCAGTGTAACCTGATCGGAGAGATTCCAGAATATTTCGGGGATATTTTCACGAACCTCGTACGGTTGGATTTGTCGAGGAACAAATTATCAGGGAGCATTCCGAGGACTTTGTTCTCGCTGAGGAAGTTGAGGTTCTTGTACCTGTTCAGTAACAGGTTGTCGGGTGTGATTCCTAGTGCTACGATGCAGTGTTTGGAATTAATAGACGTTGATTTCGCGAAGAATAATTTGACGGGTTCCATACCCCGAGAGTTTGGAGAGTTAAAGAACTTGAGTACCTTGCACTTGTACGAGAATCACTTGTTCGGTGAGATTCCCGTCAGTTTAAGCCAAATTCCTAGTCTTAAGTATTTCAGGGTTTTCAGCAATAACTTGAGTGGAACACTGCCTCCAGAACTAGGCTTGCATTCCAAGCTTGCAGCGATTGAGGTTTCTGATAACCAACTCAGTGGTGGGTTGCCGGAACATTTATGTGCAGGTGGTGCGCTTATTGGTGTGGTTGTTTCTTCCAACAATTTTAGTGGGGTTTTGCCTGAGTCGATTGTGAATTGTCCTTCTCTCGCCACGGTTCAGGTTTATGATAACAAGTTTTCGGGTGAGGTTCCTTTGGGTTTGTGGACTATGAGTAACCTTTCGTCCTTGATTTTGAGCAACAACTCTTTTTCTGGGCCTCTTCCGGGTCAAGTGTTCTGGAATATTGCAAGGATTGAGATCGCAAACAACAACTTCTCGGGTGGGATATCTGTTGGGATTACTTCAGCCAAAAATCTGGGGTTTCTTGATGCGAGAAACAACATGCTTTCGGGTGAAATTCCAAGGGAACTGACTCAACTTTCTAAGCTCACTGCTCTCATGCTGGATGGTAACCAACTTTCGGGTGCACTTCCTTCTGAGATTATTTCGTGGCAATCACTGAACACTTTGACACTATCACGAAACAAACTTTCTGGCCAAATCCCCACGGCTATTACTGCTCTTCCCCGCCTGGCTTACCTGGACTTGTCTCAAAATGACTTATCAGGTGAAATCCCCCCTCAGTTTGATAGGTTGAGGTTTGTTTTTCTCAACTTGTCCTCCAACCAGCTATCTGGGAAAATCCCTGATGAGTTCAATAACCTCGCATTTGAAAACAGTTTCTTGAACAATCCTCGTCTATGTGCTTACAATCCAAACATCCACCTTGATAACTGCTTGACCAAAACCGCATCAGCGGCACCACAGTCGAGCAATTCATCTTCGAATTCACTGGCTCTGATTCTGGCTGCCACCGCCGTTGTGTTACTGGCCATAGTTTCCTTGGTCTTCTATACGTTGAAAAGGCAATGGGGCAAAAAGCACTGCGGGCGTAAAAATAAGGTTGCAACGTGGAGGCTCACTTCATTCCAGAGGCTTGATCTCAAGGAAATAAATTTCCTCTCAAGTTTGACAGACAATAACCTCATAGGAAGTGGAGGGTTTGGGAAAGTTTACCGGATTGCTTCAAATCGTCCAGGTGAGTATGTTGCGGTGAAGAAGATCTGGAATCGCGAGGATGTGGATGACACGTTGGAGAAAGAGTTCCAGGCCGAGGTTGAGATCCTGGGCAATATTCGGCACTCGAATATAGTGAAGCTTTTGTGCTGCTATGCAAGTGAGAACTCCAAACTTCTTGTTTATGAATACATGGAAAATCAGAGCCTGGACAAATGGCTTCATGCAGAGAAGAAATCGCCTACTGGGTTGAGTTGGCCAACGAGGTTGAATATTGCCATTGGGGCTGCACAAGGTCTGTGTTACATGCACCATGAATGCTCACCCCCCGTCATCCACCGAGATGTCAAATCTAGCAATATACTGTTGGACTCGGAGTTCAGAGCTAAAATAGCAGATTTTGGGCTCGCCAAAATGTTGTCAAAGCCCGGTGAACTAAACACCATGTCTGCTCTAGCAGGCTCTTTTGGCTACATTCCACCAGAATATGCCTATTCAACTAAGATTAACGAGAAAGTTGATGTTTATAGCTTTGGCGTTGTGCTCTTAGAGCTTGTGACAGGAAGGAAACCTAATATGAGAGGCGAGCATGCATGCAGCTTAGTTGAATGGGCGTGGGAGCATTTTACTGAAGCGAAGAGCCTTACTGATGCATTCGATGAGGATATCAAAGAACCACGTTATGCGGAAGAGATGGCTAATGTCTTCAAATTGGGCCTCCTTTGCACAAGCTCCTTGCCCTCAACTAGACCTTCCGCGAAGGAGATTATGCAAGTTCTTCGTCGGTGTTGTCATTCAGGTTCTACACGCAGAAGAGTGGGAAATGAGTTTGATATCGCTCCTCTACTTAGTGACACAAGGTACGTTTGTAGTTACAAGGAGAGTAATGCTGCAACCAATAACTCATCCTGGTGA 3057 0.4707 MSKMPLFVYFHLFLLFSISVPSRVISETEQTILLTLKRQLGDPPSLRSWKPSPSAPCDWTEIGCGSDGAVTNLLLSNKGITTSKSLPSTICNLKHLLMLDLSYNSIAGEFPTTLYECSNLQYLDLSQNYLAGAVPADVDRLKTLTYLNLGGNSFSGEIPAAIGNLPELQTLHLFKNNFEGTVPKEIGNLSNLEVLGLAYNLKLAPWKIPLEFRKLRNLRYLWMTQCNLIGEIPEYFGDIFTNLVRLDLSRNKLSGSIPRTLFSLRKLRFLYLFSNRLSGVIPSATMQCLELIDVDFAKNNLTGSIPREFGELKNLSTLHLYENHLFGEIPVSLSQIPSLKYFRVFSNNLSGTLPPELGLHSKLAAIEVSDNQLSGGLPEHLCAGGALIGVVVSSNNFSGVLPESIVNCPSLATVQVYDNKFSGEVPLGLWTMSNLSSLILSNNSFSGPLPGQVFWNIARIEIANNNFSGGISVGITSAKNLGFLDARNNMLSGEIPRELTQLSKLTALMLDGNQLSGALPSEIISWQSLNTLTLSRNKLSGQIPTAITALPRLAYLDLSQNDLSGEIPPQFDRLRFVFLNLSSNQLSGKIPDEFNNLAFENSFLNNPRLCAYNPNIHLDNCLTKTASAAPQSSNSSSNSLALILAATAVVLLAIVSLVFYTLKRQWGKKHCGRKNKVATWRLTSFQRLDLKEINFLSSLTDNNLIGSGGFGKVYRIASNRPGEYVAVKKIWNREDVDDTLEKEFQAEVEILGNIRHSNIVKLLCCYASENSKLLVYEYMENQSLDKWLHAEKKSPTGLSWPTRLNIAIGAAQGLCYMHHECSPPVIHRDVKSSNILLDSEFRAKIADFGLAKMLSKPGELNTMSALAGSFGYIPPEYAYSTKINEKVDVYSFGVVLLELVTGRKPNMRGEHACSLVEWAWEHFTEAKSLTDAFDEDIKEPRYAEEMANVFKLGLLCTSSLPSTRPSAKEIMQVLRRCCHSGSTRRRVGNEFDIAPLLSDTRYVCSYKESNAATNNSSW* 1019
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g02252 1018 FunFam Kinase family with leucine-rich repeat domain-containing protein 779 990 - -
Phac9g02252 1018 Pfam Protein kinase domain 701 972 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g02252 1018 Gene3D Ribonuclease Inhibitor 181 287 IPR032675 -
Phac9g02252 1018 Gene3D Ribonuclease Inhibitor 25 180 IPR032675 -
Phac9g02252 1018 CDD STKc_IRAK 705 974 - -
Phac9g02252 1018 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 183 281 - -
Phac9g02252 1018 Pfam Leucine Rich Repeat 144 165 IPR001611 GO:0005515
Phac9g02252 1018 ProSitePatterns Protein kinases ATP-binding region signature. 705 729 IPR017441 GO:0005524
Phac9g02252 1018 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 241 976 - -
Phac9g02252 1018 Gene3D Ribonuclease Inhibitor 288 385 IPR032675 -
Phac9g02252 1018 FunFam Receptor-like protein kinase HSL1 isoform A 26 180 - -
Phac9g02252 1018 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 283 381 - -
Phac9g02252 1018 ProSitePatterns Serine/Threonine protein kinases active-site signature. 825 837 IPR008271 GO:0004672|GO:0006468
Phac9g02252 1018 SMART serkin_6 699 974 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g02252 1018 SUPERFAMILY Protein kinase-like (PK-like) 694 974 IPR011009 -
Phac9g02252 1018 PRINTS Leucine-rich repeat signature 243 256 - -
Phac9g02252 1018 PRINTS Leucine-rich repeat signature 550 563 - -
Phac9g02252 1018 Gene3D Ribonuclease Inhibitor 386 628 IPR032675 -
Phac9g02252 1018 Pfam Leucine rich repeat 225 277 IPR001611 GO:0005515
Phac9g02252 1018 SMART LRR_typ_2 502 526 IPR003591 -
Phac9g02252 1018 SMART LRR_typ_2 165 189 IPR003591 -
Phac9g02252 1018 SMART LRR_typ_2 312 336 IPR003591 -
Phac9g02252 1018 SMART LRR_typ_2 550 573 IPR003591 -
Phac9g02252 1018 SMART LRR_typ_2 240 264 IPR003591 -
Phac9g02252 1018 SMART LRR_typ_2 93 117 IPR003591 -
Phac9g02252 1018 SMART LRR_typ_2 432 456 IPR003591 -
Phac9g02252 1018 SUPERFAMILY L domain-like 39 379 - -
Phac9g02252 1018 ProSiteProfiles Protein kinase domain profile. 699 982 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g02252 1018 SUPERFAMILY L domain-like 282 599 - -
Phac9g02252 1018 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 385 625 - -
Phac9g02252 1018 FunFam Receptor-like protein kinase HSL1 679 778 - -
Phac9g02252 1018 Gene3D Phosphorylase Kinase; domain 1 680 778 - -
Phac9g02252 1018 Pfam Leucine rich repeat N-terminal domain 29 64 IPR013210 -
Phac9g02252 1018 Gene3D Transferase(Phosphotransferase) domain 1 779 992 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g02252 Phac-Chr9 21537908 21541462 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g02252 19 997 Receptor kinase-like Gene Family AT5G25930 53.144 0.0 990
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Phac9g02252 Pkinase 7.8e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g02252 - K00924 gmx:100782466 1573.14