Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g02209 ATGAACCATCATCCCTTCATCACCCTCTTCTCCACCATACTAATCTTTTCCACCACCACCCTCTCACTCTCCCAGGTTAACCAGTCACAGTTTTTCTTTCTCATCAAAGACTCTCTCCCCGGGAAGTACCCCATGAATTGGGACGCTGAGAAACCCGTGTGTAGCTTCACCAGAGTTACCTGCAACACCAGAGGTGACGTTATCAAACTCGACCTTTCAGGTTGGTCATCACTTACTGGAAAGTTTCCATCAGATACATGCTCTTATCTCCCACAGTTACGTTCTCTCCACCTCGGCCACACCAGGTTCGAGTTCAACGTAGACACCATCCTCAACTGTTCCCACTTGGAAGAGCTTAACATGAACCACATGTTCCAGACCGGCACGCTCCCAGATTTCTCTTCCTTGAAATCTCTCAGGATTCTCGACTTGTCCTACAACCTCTTCACAGGCCAGTTCCCCATGTCAGTGTTCAACCTCACCAACCTCGAGGTGCTAAACTTCAATGAAAACGGAGGCTTCAACCTGTGGCAGTTACCTGCAGATATTGACAGGTTGAAAAACCTCAGGTCCGTGGTGCTAACGACGTGCATGGTGCATGGCCAAATCCCTGCGTCCATAGGGAACATAACTTCCCTCATCGATCTTGAGCTGAGTGGGAATTTCCTCACGGGACAAATTCCGAAAGAGCTTGGTCAGCTTAGGAACCTTCAACAGCTTGAGCTTTACTATAACTACCATCTCGTTGGGAACATTCCAGAGGAGTTGGGGAACCTCACGGAGCTCGTGGATTTGGATATGTCAGTGAACAAGTTCACTGGGAGCATCCCCGCGTCGGTGTGTAGGCTTCCGAAGCTTCAAGTCTTGCAGCTCTACAACAACAGTCTCACAGGAGAAATCCCAGGTGCGATTGAAAACTCAACAGCTTTAAGAATGCTGTCTCTCTATGACAACTTTCTTGTAGGACAGGTTCCCAACAAACTGGGACAGTTCTCTAGAATGTTAGTTCTTGACTTGTCGGAGAACAAATTTTCTGGTCCGTTGCCAAGCGAGGTTTGCAAGGGTGGTACGCTAGAGTACTTTCTCGTTCTGGATAACATGTTTTCTGGAGAGATACCACAGAGTTATGCTAACTGCATGATGCTGTTGAGGTTTAGAGTGAGTAACAACCGTTTGGAGGGTTCCATTCCCGCGGGACTCCTTGGTTTACCACACGTTTCAATCATTGATTTGAGTAACAATAACTTGAATGGTCCAATTCCTGAGATTAACGGGAATTCTAGAAATCTTTCAGAACTGTTTCTTCAGAGGAACAAAATTTCAGGTGTCATAACTCCCACAATATCTCGGGCCATGAGCTTGGTCAAAATAGATTTCAGTTACAATCTTCTATCTGGTTCAATCCCTTCCGAAATAGGCAACCTCAGAAGACTCAATTTGCTTATGTTGCAAGGGAACAAGCTGAATTCTTCCATCCCCAGCTCACTCTCTTCCTTGGAGTCTCTCAACCTTCTTGATCTCTCCAACAATCTTTTAACTGGGAGCATCCCTGAAAGCCTCTCTGTGCTTCTACCAAACTCTATTAACTTCTCGCACAATATGCTTTCGGGTCCAATTCCTCCCAAACTGATCAAAGGAGGCTTGGTGGAAAGTTTTGCAGGGAATCCTGGGTTGTGTGTGCTACCGGTGTATGCTAATTCATCGGATCAAAACTTCCCCATATGTGCAAGTGCCTACAAGAGCAAGAGGATCAACACCATCTGGATAGCTGGGGTGTCAGCGGTTTTGATCTTTATTGGGTCTGCCCTGTTTCTCAAACGTAGGTGCAGCAAAGACACTGCTGCAGTGGAACATGAGGAGACACTCTCTTCTTCGTTCTTCTCTTATGACGTTAAGAGCTTCCACAAGATCTCTTTCGACCAAAAGGAGATCGTTGAGTCCTTGGTGGACAAGAACATAATAGGGCATGGAGGGTCTGGGACAGTGTACAAGATTGAGTTGAAAAGTGGTGATATTGTCGCAGTGAAGAGGCTGTGGAGTCGCAAGTCCAAGGATTCAACTCCAGAGGATCGGTTGTTTGTAGATAAGGCATTGAAGGCAGAGGTGGAGACCTTAGGAAGCATAAGACACAAGAACATAGTGAAACTATACTGCTGCTTCTCCAGTTTCGACTGCAGCTTGTTGGTTTATGAGTACATGCCAAATGGTAATCTTTGGGATTCCCTGCACAAGGGTTGGATCATTTTGGATTGGCCTACTCGTTATAGAATTGCACTGGGGATTGCACAGGGTTTAGCATACCTTCACCATGATTTGCTTCTTCCTATTATCCATCGAGACATCAAGTCAACTAATATCCTGCTGGATGTTGATTACCAGCCCAGGGTTGCAGACTTTGGGATTGCCAAGGTTTTGCAAGCAAGAGGGGTGAAGGATTCCACAACAACTGTCATTGCAGGAACGTATGGTTACTTAGCCCCAGAATTTGCATATTCATCAAGGGCCACCACGAAGTGCGACGTCTACAGTTTTGGGGTGATTTTGATGGAACTGTTAACTGGGAAGAAGCCCGTGGAGGCAGAGTTTGGAGAGAACAGAAATATTGTTTTCTGGGTTTCCAACAAAGTAGAAGGCAAGGAGGGGGCAAGACCAAGTGAGGTATTTGACCCGAGGTTATCATGTTCATTCAAGGATGACATGATCAAAGTGTTGCGGGTTGCCATTCGCTGCACCTACAAAGCCCCAACAAGCAGACCAACCATGAAAGAGGTTGTTCAGCTTCTGATTGAGGCAGAGCCACGCGGTTCCGATTCTTGCAAGTTGTCAACAAAAGATGTATCAAATGTCACCGTAGTAAAGAAACCATATGAAGTATAA 2877 0.4609 MNHHPFITLFSTILIFSTTTLSLSQVNQSQFFFLIKDSLPGKYPMNWDAEKPVCSFTRVTCNTRGDVIKLDLSGWSSLTGKFPSDTCSYLPQLRSLHLGHTRFEFNVDTILNCSHLEELNMNHMFQTGTLPDFSSLKSLRILDLSYNLFTGQFPMSVFNLTNLEVLNFNENGGFNLWQLPADIDRLKNLRSVVLTTCMVHGQIPASIGNITSLIDLELSGNFLTGQIPKELGQLRNLQQLELYYNYHLVGNIPEELGNLTELVDLDMSVNKFTGSIPASVCRLPKLQVLQLYNNSLTGEIPGAIENSTALRMLSLYDNFLVGQVPNKLGQFSRMLVLDLSENKFSGPLPSEVCKGGTLEYFLVLDNMFSGEIPQSYANCMMLLRFRVSNNRLEGSIPAGLLGLPHVSIIDLSNNNLNGPIPEINGNSRNLSELFLQRNKISGVITPTISRAMSLVKIDFSYNLLSGSIPSEIGNLRRLNLLMLQGNKLNSSIPSSLSSLESLNLLDLSNNLLTGSIPESLSVLLPNSINFSHNMLSGPIPPKLIKGGLVESFAGNPGLCVLPVYANSSDQNFPICASAYKSKRINTIWIAGVSAVLIFIGSALFLKRRCSKDTAAVEHEETLSSSFFSYDVKSFHKISFDQKEIVESLVDKNIIGHGGSGTVYKIELKSGDIVAVKRLWSRKSKDSTPEDRLFVDKALKAEVETLGSIRHKNIVKLYCCFSSFDCSLLVYEYMPNGNLWDSLHKGWIILDWPTRYRIALGIAQGLAYLHHDLLLPIIHRDIKSTNILLDVDYQPRVADFGIAKVLQARGVKDSTTTVIAGTYGYLAPEFAYSSRATTKCDVYSFGVILMELLTGKKPVEAEFGENRNIVFWVSNKVEGKEGARPSEVFDPRLSCSFKDDMIKVLRVAIRCTYKAPTSRPTMKEVVQLLIEAEPRGSDSCKLSTKDVSNVTVVKKPYEV* 959
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g02209 958 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 19 216 - -
Phac9g02209 958 ProSitePatterns Serine/Threonine protein kinases active-site signature. 776 788 IPR008271 GO:0004672|GO:0006468
Phac9g02209 958 FunFam receptor protein-tyrosine kinase CEPR1 631 732 - -
Phac9g02209 958 Gene3D Ribonuclease Inhibitor 33 175 IPR032675 -
Phac9g02209 958 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 733 946 - -
Phac9g02209 958 FunFam Receptor protein-tyrosine kinase CEPR1 283 569 - -
Phac9g02209 958 FunFam Leucine-rich repeat receptor-like protein kinase 176 279 - -
Phac9g02209 958 Pfam Protein kinase domain 650 926 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g02209 958 SMART LRR_typ_2 475 498 IPR003591 -
Phac9g02209 958 SMART LRR_typ_2 331 355 IPR003591 -
Phac9g02209 958 SMART LRR_typ_2 283 307 IPR003591 -
Phac9g02209 958 SMART LRR_typ_2 160 186 IPR003591 -
Phac9g02209 958 SMART LRR_typ_2 499 523 IPR003591 -
Phac9g02209 958 SMART LRR_typ_2 90 113 IPR003591 -
Phac9g02209 958 SMART LRR_typ_2 210 234 IPR003591 -
Phac9g02209 958 ProSitePatterns Protein kinases ATP-binding region signature. 654 676 IPR017441 GO:0005524
Phac9g02209 958 ProSiteProfiles Protein kinase domain profile. 648 929 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g02209 958 SUPERFAMILY RNI-like 252 571 - -
Phac9g02209 958 SUPERFAMILY Protein kinase-like (PK-like) 635 928 IPR011009 -
Phac9g02209 958 Gene3D Transferase(Phosphotransferase) domain 1 733 952 - -
Phac9g02209 958 SMART serkin_6 648 935 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g02209 958 Gene3D Ribonuclease Inhibitor 176 250 IPR032675 -
Phac9g02209 958 SUPERFAMILY L domain-like 68 347 - -
Phac9g02209 958 Gene3D Ribonuclease Inhibitor 251 570 IPR032675 -
Phac9g02209 958 Gene3D Phosphorylase Kinase; domain 1 631 732 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g02209 Phac-Chr9 21155492 21161262 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g02209 23 935 Receptor kinase-like Gene Family AT5G49660 64.130 0.0 1191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Phac9g02209 Pkinase 1.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g02209 - - gmx:100785822 1670.21