Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g02206 ATGTCAATGTTCGCGAGCACGCCCAAGCAGAATCTTCAGAAATCGTTCGAGGCCTTCTACGAGGGGTGGCTTGCGCGGCACGAGAATTTGCTTCAGCAGCTTCTCAGCGTGTCCCCTGACGATGCAGAACAGAGGATGATGATCGAGCAAGTTCTGTGTCATTACCAGCAATTTTTGGAAGAGAAGTCGAACGTGGCCAACGGCGACGTTTTTCTTCTCTTTTCCCCGCCCTGGCTTTCCGCCTACGAGAGGTCTCTGCTCTGGATTGGGGACTACAAGCCCTCGCTCATTCTCCGTCTCGCCGACTGTGCCGTCAAGAGCTTTACGCCGGAGCAGAGGGACAAAATGGAGCGAGTCAGGGACGAGACGAAGCGAGCCGAGAGAGAGGTTTCCGAGGCAATGGCTTCCGTTCAGGAGAGCATGGCGAGTCCGCGCATGCTGGCGCTCGTCAGAGTGGTTGACGGCGAGATAACGGAGCAGGAATTGGCGCTTCGGGGACTCAAGGAGGCGCTTAAGAAGGTTTCCGAGAGAGGAGACGCCCTTCGCGCGTCCACGATGAGGAAGGTGGTGGAGATTTTAAGTCCGCCGCAGACGGTGCAGTTACTGGCTGCAACGATTCGTTTTCAGATGCGCGTAAGGAAACACGGTTTGCACCGAGACGAGGTTGGACCGTCAGGTTGA 681 0.5639 MSMFASTPKQNLQKSFEAFYEGWLARHENLLQQLLSVSPDDAEQRMMIEQVLCHYQQFLEEKSNVANGDVFLLFSPPWLSAYERSLLWIGDYKPSLILRLADCAVKSFTPEQRDKMERVRDETKRAEREVSEAMASVQESMASPRMLALVRVVDGEITEQELALRGLKEALKKVSERGDALRASTMRKVVEILSPPQTVQLLAATIRFQMRVRKHGLHRDEVGPSG* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g02206 226 Coils Coil 116 136 - -
Phac9g02206 226 Coils Coil 157 177 - -
Phac9g02206 226 Pfam Seed dormancy control 30 100 IPR025422 GO:0006351|GO:0043565
Phac9g02206 226 ProSiteProfiles DOG1 domain profile. 13 222 IPR025422 GO:0006351|GO:0043565
Phac9g02206 226 PANTHER DOG1 DOMAIN-CONTAINING PROTEIN 15 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g02206 Phac-Chr9 21094492 21095739 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g02206 15 213 Calmodulin-binding Proteins AT1G77920 28.713 4.62e-20 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g02206 - - pvu:PHAVU_009G114600g 346.28