Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g02185 ATGGACGCCTCAAAGGAAAATCGCCCGCCTTCGTTTCCGCTCCTGCCCTCTTCAGATCTTCAAGGGCATCCAAGAATGGAGGAGACTCTGAAGCCCTTCCATCACCGGTTGCCTCTCCGCAGCATCAATCAGAATCTTATGCATAACAAAAGCCCTTCTCATTCCTGTAAGAGCAAAGGACACACAGTTGGGCACCACCACGCCCCTCAGCCTCATGCAACTAAGAAACAGAACCTGTTGGCCCCCAACCCAAGTTACCACCTAGACTCTGAAATCGTAGATATTGACGATGATGATGAGGATGCCAGTGACAATGCAGTTCCTGTATTCGTCAAGCATACTGAAGCCATGCTCGACGAAATAGACAGGATAGAGGAAATTGAAATGGAAGATGTGCAGGAACCTGTTTTAGACATCGACGCCTGCGATAGGAAAGATCCACTTGCCGTTGTTGAGTACATTGATGATATCTACATCCTCTACAAGAAAATTGAGAATTCCAGCTGTGTCTCTCCAAATTACATGACTAGTCAATTTGACATTAATGAGAGGATGAGAGCCATTCTTATTGACTGGCTTATTGAGGTTCACTACAAATTTGAGCTTTTGGAGGAGACATTGTTCCTTACTGTCAATCTAATAGACAGGTTCTTGGAGCGTCAGGCAATGATCAGAAAGAAACTTCAGTTAGTTGGTGTAACAGCTATGCTAATAGCTTGTAAGTACGAGGAGGTCTCAGTCCCTACCGTTGAGGATTTTATTCTGATAACGGACAAGGCATATACAAGAGATGAAGTTTTAGATATGGAGAAATTGATGATGAACATCTTGCAATTCAACTTGTCTGTGCCTACTCCATACATGTTCATGAGAAGATTTCTTAAGGCAGCTCATTCTGATAAAAAGCTGGAGCTCTTGTCCTTCTTCTTGGTTGAGCTTTGCTTGGTGGAATGCAAAATGCTGAAGTTTTCACCATCTTTGCTAGCTGCTGCAGCCATATACACAGCTCAATGTAGCATGTACCAGTTTAAGCAATGGACTAAGACTAGCGAGTGGTATACTGATTACTCAGAGGAGCAGCTTTTGTGA 1089 0.4362 MDASKENRPPSFPLLPSSDLQGHPRMEETLKPFHHRLPLRSINQNLMHNKSPSHSCKSKGHTVGHHHAPQPHATKKQNLLAPNPSYHLDSEIVDIDDDDEDASDNAVPVFVKHTEAMLDEIDRIEEIEMEDVQEPVLDIDACDRKDPLAVVEYIDDIYILYKKIENSSCVSPNYMTSQFDINERMRAILIDWLIEVHYKFELLEETLFLTVNLIDRFLERQAMIRKKLQLVGVTAMLIACKYEEVSVPTVEDFILITDKAYTRDEVLDMEKLMMNILQFNLSVPTPYMFMRRFLKAAHSDKKLELLSFFLVELCLVECKMLKFSPSLLAAAAIYTAQCSMYQFKQWTKTSEWYTDYSEEQLL* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g02185 362 SUPERFAMILY Cyclin-like 145 281 IPR036915 -
Phac9g02185 362 Pfam Cyclin, C-terminal domain 284 361 IPR004367 -
Phac9g02185 362 CDD CYCLIN_AtCycB-like_rpt1 134 279 - -
Phac9g02185 362 Gene3D - 170 282 - -
Phac9g02185 362 Gene3D - 156 361 - -
Phac9g02185 362 PIRSF Cyclin_A_B_D_E 17 362 IPR046965 GO:0016538|GO:0044772
Phac9g02185 362 ProSitePatterns Cyclins signature. 186 217 IPR006671 -
Phac9g02185 362 SUPERFAMILY Cyclin-like 283 361 IPR036915 -
Phac9g02185 362 MobiDBLite consensus disorder prediction 1 26 - -
Phac9g02185 362 SMART cyclin_7 288 362 IPR013763 -
Phac9g02185 362 SMART cyclin_7 191 275 IPR013763 -
Phac9g02185 362 Pfam Cyclin, N-terminal domain 156 282 IPR006671 -
Phac9g02185 362 PANTHER CYCLINS 99 340 IPR039361 -
Phac9g02185 362 MobiDBLite consensus disorder prediction 46 83 - -
Phac9g02185 362 FunFam G2/mitotic-specific cyclin 170 282 - -
Phac9g02185 362 SMART Cyclin_C_2 284 362 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g02185 Phac-Chr9 20877596 20880592 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g02185 1 362 Core Cell Cycle Gene Families AT1G20610 53.571 2.98e-136 393
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g02185 K21777 - gmx:100812029 530.406