Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g02179 ATGTTTATGCTTCCACTCAGTATAGCAGAGTCAATGGACGCCTCAAAGGAAAATCGCCCGCCTTCGTTTCCGCTCCTGCCCTCTTCAGATCTTCAAGGGCATCCAAGAATGGAGGAGACTCTGAAGCCCTTCCATCACCGGTTGCCTCTCCGCAGCATCAATCAGAATCTTATGCATAACAAAAGCCCTTCTCATTCCTGTAAGAGCAAAGGACACACAGTTGGGCACCACCACGCCCCTCAGCCTCATGCAACTAAGAAACAGAACCTGTTGGCCCCCAACCCAAGTTACCACCTAGACTCTGAAATCGTAGATATTGACGATGATGATGAGGATGCCAGTGACAATGCAGTTCCTGTATTCGTCAAGCATACTGAAGCCATGCTCGACGAAATAGACAGGATAGAGGAAATTGAAATGGAAGATGTGCAGGAACCTGTTTTAGACATCGACGCCTGCGATAGGAAAGATCCACTTGCCGTTGTTGAGTACATTGATGATATCTACATCCTCTACAAGAAAATTGAGAATTCCAGCTGTGTCTCTCCAAATTACATGACTAGTCAATTTGACATTAATGAGAGGATGAGAGCCATTCTTATTGACTGGCTTATTGAGGTTCACTACAAATTTGAGCTTTTGGAGGAGACATTGTTCCTTACTGTCAATCTAATAGACAGGTTCTTGGAGCGTCAGGCAATGATCAGAAAGAAACTTCAGTTAGTTGGTGTAACAGCTATGCTAATAGCTTGTAAGTACGAGGAGGTCTCAGTCCCTACCGTTGAGGATTTTATTCTGATAACGGACAAGGCATATACAAGAGATGAAGTTTTAGATATGGAGAAATTGATGATGAACATCTTGCAATTCAACTTGTCTGTGCCTACTCCATACATGTTCATGAGAAGATTTCTTAAGGCAGCTCATTCTGATAAAAAGCTGGAGCTCTTGTCCTTCTTCTTGGTTGAGCTTTGCTTGGTGGAATGCAAAATGCTGAAGTTTTCACCATCTTTGCTAGCTGCTGCAGCCATATACACAGCTCAATGTAGCATGTACCAGTTTAAGCAATGGACTAAGACTAGCGAGTGGTATACTGATTACTCAGAGGAGCAGCTTTTGTGA 1122 0.4349 MFMLPLSIAESMDASKENRPPSFPLLPSSDLQGHPRMEETLKPFHHRLPLRSINQNLMHNKSPSHSCKSKGHTVGHHHAPQPHATKKQNLLAPNPSYHLDSEIVDIDDDDEDASDNAVPVFVKHTEAMLDEIDRIEEIEMEDVQEPVLDIDACDRKDPLAVVEYIDDIYILYKKIENSSCVSPNYMTSQFDINERMRAILIDWLIEVHYKFELLEETLFLTVNLIDRFLERQAMIRKKLQLVGVTAMLIACKYEEVSVPTVEDFILITDKAYTRDEVLDMEKLMMNILQFNLSVPTPYMFMRRFLKAAHSDKKLELLSFFLVELCLVECKMLKFSPSLLAAAAIYTAQCSMYQFKQWTKTSEWYTDYSEEQLL* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g02179 373 MobiDBLite consensus disorder prediction 13 32 - -
Phac9g02179 373 PIRSF Cyclin_A_B_D_E 28 373 IPR046965 GO:0016538|GO:0044772
Phac9g02179 373 Gene3D - 181 293 - -
Phac9g02179 373 ProSitePatterns Cyclins signature. 197 228 IPR006671 -
Phac9g02179 373 SUPERFAMILY Cyclin-like 156 292 IPR036915 -
Phac9g02179 373 SUPERFAMILY Cyclin-like 294 372 IPR036915 -
Phac9g02179 373 PANTHER CYCLINS 110 351 IPR039361 -
Phac9g02179 373 SMART Cyclin_C_2 295 373 IPR004367 -
Phac9g02179 373 FunFam G2/mitotic-specific cyclin 181 293 - -
Phac9g02179 373 Pfam Cyclin, N-terminal domain 167 293 IPR006671 -
Phac9g02179 373 Gene3D - 167 372 - -
Phac9g02179 373 MobiDBLite consensus disorder prediction 57 94 - -
Phac9g02179 373 CDD CYCLIN_AtCycB-like_rpt1 145 290 - -
Phac9g02179 373 Pfam Cyclin, C-terminal domain 295 372 IPR004367 -
Phac9g02179 373 SMART cyclin_7 299 373 IPR013763 -
Phac9g02179 373 SMART cyclin_7 202 286 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g02179 Phac-Chr9 20877596 20880592 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g02179 12 373 Core Cell Cycle Gene Families AT1G20610 53.571 3.56e-136 393
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g02179 K21777 - gmx:100812029 530.406