Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g02178 ATGGACGCCTCAAAGGAAAATCGCCCGCCTTCGTTTCCGCTCCTGCCCTCTTCAGATCTTCAAGGGCATCCAAGAATGGAGGAGACTCTGAAGCCCTTCCATCACCGGTTGCCTCTCCGCAGCATCAATCAGAATCTTATGCATAACAAAAGCCCTTCTCATTCCTGTAAGAGCAAAGGACACACAGTTGGGCACCACCACGCCCCTCAGCCTCATGCAACTAAGAAACAGAACCTGTTGGCCCCCAACCCAAGTTACCACCTAGACTCTGAAATCGTAGATATTGACGATGATGATGAGGATGCCAGTGACAATGCAGTTCCTGTATTCGTCAAGCATACTGAAGCCATGCTCGACGAAATAGACAGGATAGAGGAAATTGAAATGGAAGATGTGCAGGAACCTGTTTTAGACATCGACGCCTGCGATAGGAAAGATCCACTTGCCGTTGTTGAGTACATTGATGATATCTACATCCTCTACAAGAAAATTGAGAATTCCAGCTGTGTCTCTCCAAATTACATGACTAGTCAATTTGACATTAATGAGAGGATGAGAGCCATTCTTATTGACTGGCTTATTGAGGTTCACTACAAATTTGAGCTTTTGGAGGAGACATTGTTCCTTACTGTCAATCTAATAGACAGGTTCTTGGAGCGTCAGGCAATGATCAGAAAGAAACTTCAGTTAGTTGGTGTAACAGCTATGCTAATAGCTTGTAAGTACGAGGAGGTCTCAGTCCCTACCGTTGAGGATTTTATTCTGATAACGGACAAGGCATATACAAGAGATGAAGTTTTAGATATGGAGAAATTGATGATGAACATCTTGCAATTCAACTTGTCTGTGCCTACTCCATACATGTTCATGAGAAGATTTCTTAAGGCAGCTCATTCTGATAAAAAGCTGGAGCTCTTGTCCTTCTTCTTGGTTGAGCTTTGCTTGGTGGAATGCAAAATGCTGAAGTTTTCACCATCTTTGCTAGCTGCTGCAGCCATATACACAGCTCAATGTAGCATGTACCAGTTTAAGCAATGGACTAAGACTAGCGAGTGGTATACTGATTACTCAGAGGAGCAGCTTTTAGAATGCTCAAGGCTGATGGTTACTTTCCATGGAAAAGCTGGATCAGGGAAACTCACTGGTGTATATAGAAAGTACAGTACATTGAAGTATGGCTGTGCCACAAAAATAGAACCAGCTCTGTTTTTACTGGATAATTAA 1224 0.4306 MDASKENRPPSFPLLPSSDLQGHPRMEETLKPFHHRLPLRSINQNLMHNKSPSHSCKSKGHTVGHHHAPQPHATKKQNLLAPNPSYHLDSEIVDIDDDDEDASDNAVPVFVKHTEAMLDEIDRIEEIEMEDVQEPVLDIDACDRKDPLAVVEYIDDIYILYKKIENSSCVSPNYMTSQFDINERMRAILIDWLIEVHYKFELLEETLFLTVNLIDRFLERQAMIRKKLQLVGVTAMLIACKYEEVSVPTVEDFILITDKAYTRDEVLDMEKLMMNILQFNLSVPTPYMFMRRFLKAAHSDKKLELLSFFLVELCLVECKMLKFSPSLLAAAAIYTAQCSMYQFKQWTKTSEWYTDYSEEQLLECSRLMVTFHGKAGSGKLTGVYRKYSTLKYGCATKIEPALFLLDN* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g02178 407 SMART cyclin_7 288 370 IPR013763 -
Phac9g02178 407 SMART cyclin_7 191 275 IPR013763 -
Phac9g02178 407 Pfam Cyclin, C-terminal domain 284 399 IPR004367 -
Phac9g02178 407 SMART Cyclin_C_2 284 401 IPR004367 -
Phac9g02178 407 SUPERFAMILY Cyclin-like 283 400 IPR036915 -
Phac9g02178 407 SUPERFAMILY Cyclin-like 145 281 IPR036915 -
Phac9g02178 407 CDD CYCLIN_AtCycB-like_rpt1 134 279 - -
Phac9g02178 407 ProSitePatterns Cyclins signature. 186 217 IPR006671 -
Phac9g02178 407 PIRSF Cyclin_A_B_D_E 17 407 IPR046965 GO:0016538|GO:0044772
Phac9g02178 407 MobiDBLite consensus disorder prediction 1 26 - -
Phac9g02178 407 FunFam G2/mitotic-specific cyclin-1 268 396 - -
Phac9g02178 407 CDD CYCLIN_AtCycB-like_rpt2 284 400 - -
Phac9g02178 407 Gene3D - 156 395 - -
Phac9g02178 407 MobiDBLite consensus disorder prediction 46 83 - -
Phac9g02178 407 Gene3D - 170 282 - -
Phac9g02178 407 Pfam Cyclin, N-terminal domain 156 282 IPR006671 -
Phac9g02178 407 PANTHER CYCLINS 100 389 IPR039361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g02178 Phac-Chr9 20877596 20880592 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g02178 1 405 Core Cell Cycle Gene Families AT1G20610 54.253 3.89e-157 448
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g02178 K21777 - gmx:100812029 613.609