Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g02150 ATGGTGAGTGGCGAACACAACCTGCCAAGTCCAACCATGAAACAGTACAACGTTAACATCTCCGATCAGAGCATGTCGAAGAACCACATCTCACCCACACCACATAGGTTTCGGTCCAGAAGGAGGAAAACCACTTCTGCTTGGCCCTTCTCATCGCTCAGCCTCCGCGAATACGGCATCCACAACACTAACAGTCCCTACTACAAGGGTCTCACTGATCAGTCCCTTGCCATTGTGGACGCCATACCCTCCTCCTGCACTCAACCTCAACCTCAACCTCAACCTCATCCTCATCCTCATACCCCTTCCACCGACCTCCTTTCCAGTCCTTATTATAAAGGCCTTACAGACTATTCCCTTGTTATTGGCCCCTTGACCTCTCACCACCATCCCTCCTTCTCTTCCACCCCCAGTCCTTACTATGCTGGTCTTCTCACTCACTACACCCTTCTACTTCATGCACCCTCACTTCAACCTCCTTTCACTCACTTCCAACCTCCTATCCAAACTACGGAAGGGATAACTCCCCCTCCAAACCTCAAGACCGACTCTACTTTGAAGGACTTGATGGTCCACGCTGATCAAGTTGACTTTCTTATTCAAGAAACTAACCAATTTGGCAATTATGCATTGGAAGAACTTGGCCAGAGGGAGAATGATGTTGATGTTGAGATGGTGATTGAAGAGAAGGCATGGGAGAGTGTATTCGAGCATAAGTTTGAGGGTGTATCAGAAGAAACAATCTGGGATATGAGGTTGACGAGTGATGGTGTTATTGAAGAGAAACCATTGGGGGAGAAAGCTTCAGAAAGAAGGGAGGATGCAGTGGAGATGGATGTGTGGAAGGAAGAGGAAGTGAAAGTGTGTGAAGAGAGAGTAAGAGTTTTTGTTTCATCAGAGGGAGATGTGTACAACTATAACTATACATGGGCAGCCAAACACCAACCCAAGACTTTGGAAGACTTCATCTGCAACAAAGATAAAGCACATCAACTCAAAACAATGGTAAAAGATGGTTGTGGGTGCAGTCACTTTATATTTGAAGGACCACCCAGTGTGGGAAAGAGATCCATGATAAGGGCTATGCTTGGAGAGGTATTTGGAGCCGACAGGGTCCAGGTCACAGAAGAATATAAAAACTTCATTTTGAAGGGAGAAATGGTTGATAGTGTGCAAGTGCGCGTGAAGAAATCACTCCATCATGTTGAGGTGAATCTGTCAGAGACAAAGGGATACGAAAAACATGTAATTGTTGATTTATTCAAGGAAACATATGGTCAGGTGATAGATAACTCGCAGCCTTGTTTCCCAGACAACTGCAAAGCAATCGTTTTGTATGAGGCGGAGAAGCTATCCATAGAATCGTTGTTGTATATTAAGTGGCTGCTAGAGAAGTATGAAGGCTGTAATAAGGTTTTCTTCTGTTGCTCTGATGAATCCAAGCTCCAACCTGTGAAGCCACTTTGTATCACTATCCGTCTTTCATCGCCATCAACCCAAGAGCTAGCTAAGATTTTGGAAAACATTGCAAAAGAAGAAGGAATACAGTTATCACGCCACTTACTCGATACCATAGTTTTGAGATCCAGAAACAATCTACGCCAAGCCATTCGTTCGTTAGAGGCCACTTGCCGAAACAGGGATGTTCTGAAAGACGAGGATGTGATTCTAACAGGGTGGGAAGAAGATATTTTGGATATTGCCAAGAACATAATCCAAGAGCAAAGTCCACGACAACTGTACGCCATTCGTAGAAAGCTGCGAAGTCTTATGAGCCATGACGTTCCTCCTGACTATATTTACAAGTCTTTGGTACCAGAGTTAACCACTCTTGTTCATCCCTCCCTACGCCCAGGGATTGCCAAACTCGACAGGGAGTTCATGAGACCCAGTGAAACTACGAAGCAGCACTTCTGTCATGCTCAAAACAAACAATCGGAATCTGACGACAAGAACAATGATTCAACAAAAAGGAATACCTTAACTTACTTAAAATTGGAAGAGTTTATAGCGAAAGTGATGAGCTGGTACAAGAATTGGTCTGAAAAAGACAATAAGCAGTAG 2064 0.4443 MVSGEHNLPSPTMKQYNVNISDQSMSKNHISPTPHRFRSRRRKTTSAWPFSSLSLREYGIHNTNSPYYKGLTDQSLAIVDAIPSSCTQPQPQPQPHPHPHTPSTDLLSSPYYKGLTDYSLVIGPLTSHHHPSFSSTPSPYYAGLLTHYTLLLHAPSLQPPFTHFQPPIQTTEGITPPPNLKTDSTLKDLMVHADQVDFLIQETNQFGNYALEELGQRENDVDVEMVIEEKAWESVFEHKFEGVSEETIWDMRLTSDGVIEEKPLGEKASERREDAVEMDVWKEEEVKVCEERVRVFVSSEGDVYNYNYTWAAKHQPKTLEDFICNKDKAHQLKTMVKDGCGCSHFIFEGPPSVGKRSMIRAMLGEVFGADRVQVTEEYKNFILKGEMVDSVQVRVKKSLHHVEVNLSETKGYEKHVIVDLFKETYGQVIDNSQPCFPDNCKAIVLYEAEKLSIESLLYIKWLLEKYEGCNKVFFCCSDESKLQPVKPLCITIRLSSPSTQELAKILENIAKEEGIQLSRHLLDTIVLRSRNNLRQAIRSLEATCRNRDVLKDEDVILTGWEEDILDIAKNIIQEQSPRQLYAIRRKLRSLMSHDVPPDYIYKSLVPELTTLVHPSLRPGIAKLDREFMRPSETTKQHFCHAQNKQSESDDKNNDSTKRNTLTYLKLEEFIAKVMSWYKNWSEKDNKQ* 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g02150 687 MobiDBLite consensus disorder prediction 84 107 - -
Phac9g02150 687 SUPERFAMILY post-AAA+ oligomerization domain-like 559 622 IPR008921 GO:0003677|GO:0006260
Phac9g02150 687 Gene3D - 308 497 IPR027417 -
Phac9g02150 687 Gene3D - 498 558 - -
Phac9g02150 687 FunFam replication factor C subunit 3 498 556 - -
Phac9g02150 687 FunFam Replication factor C subunit 3 308 497 - -
Phac9g02150 687 MobiDBLite consensus disorder prediction 642 656 - -
Phac9g02150 687 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 309 623 - -
Phac9g02150 687 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 306 555 IPR027417 -
Phac9g02150 687 Gene3D - 559 677 - -
Phac9g02150 687 MobiDBLite consensus disorder prediction 24 43 - -
Phac9g02150 687 CDD HLD_clamp_RFC 497 555 - -
Phac9g02150 687 MobiDBLite consensus disorder prediction 634 656 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g02150 Phac-Chr9 20388409 20393326 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g02150 310 680 Core DNA Replication Machinery Family AT5G27740 30.053 4.35e-46 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g02150 K10756 - gmx:102664389 760.37