Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Phac9g02147 | ATGGTGGTTGGGAGAGTTGTTGTTCCGAATCCTCCCTCCAATCTGTTCCACAATCCTTCTTCTGCTGCCACGCTCATACCTCTACACACTCGTCTTCTCTCTTTCTCCGCTTCCGCCGCCGCCTCCTCCTCCTCCTCCTCCTCCTCCGCCAATCGCACTCGCCACACTCCCACTACCAACAACGACTCTCCCTTCTCAACTTTCGGAAGACTCAAGGATCAGAAACCGAAGACTGTGCTTCACAGAAGCAAGGACCGAAGACGCGAAGAAGAAGAAGAAGACGATAACGATGATGATGAGGACTACAACGACAATCACGCAGCTCCCAGACGCAGACCTTCTCAGTCACGGTCTCGGTCAGGTGGACGAGAACGAGGAGGATGGGATATCATTCCCAGGTTTCCCTCACAAGCCAAAACCACCACTGACACCAACTTCTTCAGTCTCAAGTCATTTAAAGAAGTTGGGTGCGCTGACTACATCCTTCAATCCCTCCAAAAAATCTTCTTAACGCGCCCTTCCCATGTGCAGGCCATGGCTTTTGCTCCTGTTCTCAGCGGAAAGACTTGTGTCATAGCTGACCAAAGTGGTTCTGGAAAGACATTAGCTTATCTTGTACCAATCATTCAGCGTGTTAGACAAGAAGAACTTGAAGGACGTAGTCAATCCTCTTCACAAGCTCCTAGAGTCCTTGTACTCGCACCCACTGCGGAGTTAGCTTCTCAGGTCTTAGATAATTGTCGATCCTTGTCAAAATCTGGGGTTCCGTTCAAATCTATGGTTGTCACGGGAGGTTTTCGACAAAGGACTCAACTAGAAAGTTTACAGCAGGGAGTTGATGTCTTAATAGCTACTCCTGGCCGTTTTTTGTACCTCATGAATGAAGGCTTCTTGCAGTTAACAAATCTAAGATGTGCTGTGTTGGATGAGGTAGATATTCTCTTTGGTGATGAGGACTTTGAAGTGGCTCTTCAACGCCTGATCAGTTCTTCACCGGTTGACACACAGTATCTATTTGTGACTGCAACTTTACCAAAAAATGTTTTCACCAAATTGGTTGAAGTTTTTCCGGATTGCGAAATGATTATGGGACCTGGTATGCATCGCATAAGTTCTCGCCTTGAGGAGATTCTAGTAGATTGCAGTGGAGAGGATGGACAAGAAAAAACTCCTGATACAGCATTTTTGAACAAGAAAACCGCACTTGTGCAGCTTGTGGAGGAAAGTCCTGTTCCAAGAACTATTGTGTTCTGCAACAAGATTGAAACATGCAGAAAAGTTGAAAATTCATTAAAGCGTTTTGATAGAAAAGGAAATCGCATGCAAGTTCTACCCTTCCATGCTGCCATGACACAAGAATCACGGCTTGCTAGCATGGAAGAGTTTACACGTTCTCCATCAAAAGGAGTCTCCCAGTTTATGGTTTGCACTGACAGGGCTTCACGGGGAATAGACTTTGCAGGAGTGGATCATGTCATACTCTTTGACTTCCCGCGTGATCCAAGTGAATATGTACGGCGTGTTGGAAGAACAGCCAGAGGGGCGAAGGGAGTAGGAAAGGCATTTATTTTTGTGGTTGGCAAGCAAGTATCCCTTGCAAGCAAAATAATGGAAAGAAGTCGGAAGGGTCACCCGCTACATGATGTGCCTTCGCCATATTAG | 1662 | 0.4639 | MVVGRVVVPNPPSNLFHNPSSAATLIPLHTRLLSFSASAAASSSSSSSSANRTRHTPTTNNDSPFSTFGRLKDQKPKTVLHRSKDRRREEEEEDDNDDDEDYNDNHAAPRRRPSQSRSRSGGRERGGWDIIPRFPSQAKTTTDTNFFSLKSFKEVGCADYILQSLQKIFLTRPSHVQAMAFAPVLSGKTCVIADQSGSGKTLAYLVPIIQRVRQEELEGRSQSSSQAPRVLVLAPTAELASQVLDNCRSLSKSGVPFKSMVVTGGFRQRTQLESLQQGVDVLIATPGRFLYLMNEGFLQLTNLRCAVLDEVDILFGDEDFEVALQRLISSSPVDTQYLFVTATLPKNVFTKLVEVFPDCEMIMGPGMHRISSRLEEILVDCSGEDGQEKTPDTAFLNKKTALVQLVEESPVPRTIVFCNKIETCRKVENSLKRFDRKGNRMQVLPFHAAMTQESRLASMEEFTRSPSKGVSQFMVCTDRASRGIDFAGVDHVILFDFPRDPSEYVRRVGRTARGAKGVGKAFIFVVGKQVSLASKIMERSRKGHPLHDVPSPY* | 554 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Phac9g02147 | 553 | PANTHER | DEAD-BOX ATP-DEPENDENT RNA HELICASE 50 | 43 | 550 | - | - | |
Phac9g02147 | 553 | Gene3D | - | 395 | 548 | IPR027417 | - | |
Phac9g02147 | 553 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 184 | 526 | IPR027417 | - | |
Phac9g02147 | 553 | Pfam | DEAD/DEAH box helicase | 175 | 348 | IPR011545 | GO:0003676|GO:0005524 | |
Phac9g02147 | 553 | ProSiteProfiles | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 181 | 362 | IPR014001 | - | |
Phac9g02147 | 553 | MobiDBLite | consensus disorder prediction | 74 | 90 | - | - | |
Phac9g02147 | 553 | SMART | helicmild6 | 425 | 515 | IPR001650 | - | |
Phac9g02147 | 553 | SMART | ultradead3 | 169 | 377 | IPR014001 | - | |
Phac9g02147 | 553 | Pfam | Helicase conserved C-terminal domain | 398 | 514 | IPR001650 | - | |
Phac9g02147 | 553 | MobiDBLite | consensus disorder prediction | 41 | 135 | - | - | |
Phac9g02147 | 553 | Gene3D | - | 129 | 361 | IPR027417 | - | |
Phac9g02147 | 553 | ProSiteProfiles | Superfamilies 1 and 2 helicase C-terminal domain profile. | 401 | 553 | IPR001650 | - | |
Phac9g02147 | 553 | MobiDBLite | consensus disorder prediction | 103 | 126 | - | - | |
Phac9g02147 | 553 | CDD | DEADc | 161 | 348 | - | - | |
Phac9g02147 | 553 | CDD | SF2_C_DEAD | 374 | 525 | - | - | |
Phac9g02147 | 553 | MobiDBLite | consensus disorder prediction | 41 | 68 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Phac9g02147 | Phac-Chr9 | 20370889 | 20375821 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Phac9g02147 | 149 | 523 | Eukaryotic Initiation Factors Gene Family | AT3G19760 | 27.660 | 1.99e-30 | 121 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Phac9g02147 | K13179 | - | gmx:100784377 | 806.979 |