Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g02122 ATGGGAAGGTCCCCTTGTTGTGAGAAAGCACACACAAACAAAGGTGCATGGACCAAAGAAGAAGACGATCGCCTCATAGCTTACATTAGAGCTCACGGTGAAGGCTGCTGGCGCTCTCTCCCCAAAGCCGCCGGCCTTCTCCGCTGCGGCAAGAGCTGCCGTCTCCGCTGGATCAACTACCTCCGCCCTGACCTCAAACGCGGGAATTTCACAGAAGAAGAGGACGAACTCATCATCAAACTCCACAGCCTCCTTGGGAACAAGTGGTCTCTGATAGCTGGAAGATTGCCGGGGAGAACAGACAATGAGATAAAGAATTACTGGAACACTCACATAAGAAGGAAGCTTTTGAGCAGAGGAATTGACCCTGCAACTCACAGGCCTCTCAACGACTCTCCTCGTCAAAATCAGGTCCAAGAATCCGCCGGCGCAGCCACCATATCTTTTGCTCCCAAACAAGAGGAAAAGGAGAACGTGTTCGTGGAGGTTAAGGATTCGAAAAGTCCCACATCGGAACGGTGCCCTGACTTGAACCTTGAGCTAAGCATCAGTCCTCCCCATCATGAGCGGGAGGAGGGTGATGATGAAGATGAAATGAAGAGTATTGGGAGAAGCCTTTGCTTTGCCTGCAGTTTGGGTTTGCAAAACAGCAAAGACTGTACCTGTGCCCTCAATGCCAACACTGCTAATGCCAACGCTTCTGCTGCCACTGGCTTTGATTTCTTGGGCTTGAAAACCAATCCTTTGGACTACAGAACCTTGCAAATGAAATTAAATTAA 780 0.4987 MGRSPCCEKAHTNKGAWTKEEDDRLIAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLLSRGIDPATHRPLNDSPRQNQVQESAGAATISFAPKQEEKENVFVEVKDSKSPTSERCPDLNLELSISPPHHEREEGDDEDEMKSIGRSLCFACSLGLQNSKDCTCALNANTANANASAATGFDFLGLKTNPLDYRTLQMKLN* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g02122 259 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Phac9g02122 259 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Phac9g02122 259 CDD SANT 69 112 IPR001005 -
Phac9g02122 259 SMART sant 66 114 IPR001005 -
Phac9g02122 259 SMART sant 13 63 IPR001005 -
Phac9g02122 259 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 180 - -
Phac9g02122 259 MobiDBLite consensus disorder prediction 160 197 - -
Phac9g02122 259 CDD SANT 16 61 IPR001005 -
Phac9g02122 259 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Phac9g02122 259 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Phac9g02122 259 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Phac9g02122 259 Gene3D - 14 66 - -
Phac9g02122 259 FunFam MYB transcription factor MYB48 69 171 - -
Phac9g02122 259 FunFam MYB-related transcription factor 13 66 - -
Phac9g02122 259 Gene3D - 68 143 - -
Phac9g02122 259 SUPERFAMILY Homeodomain-like 13 108 IPR009057 -
Phac9g02122 259 MobiDBLite consensus disorder prediction 183 197 - -
Phac9g02122 259 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g02122 Phac-Chr9 20135073 20136720 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g02122 1 257 MYB Transcription Factor Family AT4G38620 59.170 5.70e-112 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phac9g02122 Myb_DNA-binding 3.6e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g02122 K09422 - tcc:18607558 365.155