Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g02102 ATGGAGGGTGAGGATGATATAGGGCGTTGGGTGTTAGAGTTCCTTCTTCGGAACCCGCCGGCACTCACAGGCAATAACCTAATAAAAAATGTGTTTCGGAGAATCTCCGTTTCTGACGCCAATTCCATAATCAAGAAGACCGTTCTCCTCAGATCTCTTCATGACCACCTCTCCACTCTCTCCATCAATGAATCCCTTCTCCAAACCCTCGATCTCCTCGAGGAACTTCTTCGCCGCGACGCCTCTCCTGTCACCGCCACCATGACCTCTGCCTACTGCGCCGTTGCGGTCGATTGCACGCTCAAGTACCTGCAAATGAATCTCCACCATCACAACTCTGCTTACCTCCGCGCCGTCAACAGGATATGGCGAGCTAGGGTTGCGCACATGAACGGCTCCGATTCCAGAGAGGGAAGCCTTCTGTTCTCGGCGGAGTTCGAGCGGTGGAGAAGCGACATCGAAGCTTCCCTTTCGGATTCGCAAGTGAGGGAGAGGTTGGCCTCCACCGATGCCAGAAAGGATTCCATCATGAAGCTCGAGGCTTTTTTGGCGGAAGCCTGGGCCGATTTGGGCCCTTCTTTTCTTCAGTTAGCGGCGTCATTGCACGCGAGCAGGGCCCCACAACACCAAGAGGGAGAAATTCAGATGTGTAGCAGTGCTGCTGCTGAGAATTTGCATTTAACAACAACTATTGAAGTTGAACAGGATGGGGAATGCATTCCTGGGGAGTTGCAAATGTTGGCTAAGGATTCCCTACTTAATTCTTTTGAAGCGAATGAGGAGGCACCTACTGAAAAGCAGAGTGGAGAGGCAGATGTATCTTGCTCACATGGCATTAATAATAATGAGGCTGATCCCATGGAAAAGGATCGAACTTCTATCCCTCAGAATTTTGACCAAAGGCCTAGTTTGATGGAAAAAAATATTACCGCTCGTGTTTATGAGTGGGATGATTCGATAGACGGCATGGACGGTGGAACATCAAACTTTGCAAGTAGATTTAATTTGCCTACTCCAAAGAGGAGAACACTTTCTCCATTGAAGATATATAAACCAACAAGCATTACAAAGAGGAGAAAAGTAAATAAATGGAGTCAGTTAGAAGAGGAGGCGCTTAGGACTGGCGTAGAAAAGTTTGGCAGGGGAAATTGGAAGTTAATCCTAAATTCTCACAAAGATATATTTGAAGAGAGAACTGAAGTTGATTTGAAGGACAAGTGGAGAAATATGACGCGGTATGGGTGCAAATGA 1251 0.4748 MEGEDDIGRWVLEFLLRNPPALTGNNLIKNVFRRISVSDANSIIKKTVLLRSLHDHLSTLSINESLLQTLDLLEELLRRDASPVTATMTSAYCAVAVDCTLKYLQMNLHHHNSAYLRAVNRIWRARVAHMNGSDSREGSLLFSAEFERWRSDIEASLSDSQVRERLASTDARKDSIMKLEAFLAEAWADLGPSFLQLAASLHASRAPQHQEGEIQMCSSAAAENLHLTTTIEVEQDGECIPGELQMLAKDSLLNSFEANEEAPTEKQSGEADVSCSHGINNNEADPMEKDRTSIPQNFDQRPSLMEKNITARVYEWDDSIDGMDGGTSNFASRFNLPTPKRRTLSPLKIYKPTSITKRRKVNKWSQLEEEALRTGVEKFGRGNWKLILNSHKDIFEERTEVDLKDKWRNMTRYGCK* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g02102 416 ProSiteProfiles Myb-like domain profile. 356 411 IPR001005 -
Phac9g02102 416 CDD SANT_TRF 363 412 - -
Phac9g02102 416 Gene3D - 364 416 - -
Phac9g02102 416 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 356 415 IPR017930 -
Phac9g02102 416 Pfam Myb-like DNA-binding domain 362 410 IPR001005 -
Phac9g02102 416 PANTHER MYB TRANSCRIPTION FACTOR 6 413 - -
Phac9g02102 416 SMART sant 360 413 IPR001005 -
Phac9g02102 416 SUPERFAMILY Homeodomain-like 362 414 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g02102 Phac-Chr9 19866055 19874483 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g02102 7 410 Single Myb Histone (SMH) Gene Family AT1G15720 28.571 9.10e-32 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Phac9g02102 Myb_DNA-binding 7.5e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g02102 - K11111 ccaj:109817184 488.419