Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g02087 ATGGTGCTCCTTCTTCCTAAGCCGAAGTTGATAATCTTTTTTGCTCTCTTCATTTTATCAGATTGCTTTGACCCCTTGGATCCTACTGGGAATATTTCCGTAACTTTTGACATTTACCAACGTACAGATAATGGATATCTGGCAAGGGTGACACTTCAGAACTACCATCAGTATCGGCATGTGGAGAAACCAGGGTGGAAGCTAGGATGGAGATGGGCTAACAATGAAGTGATATGGTCAATGAGTGGTGCCATAGCAACTGACAGAGGAAATTGCTCATCTTACAGCGGCTCTCAGATGCCACATTCCTGCAATAATGATCCCATCATAGTTGATCTCTCTCCAGAAATCTCAAAAAACAGGTCAGAGCATTGTTGCCGTGGTGGCCTCCTCTCTGCCTGGTCTATTGATCCTTTCAATGCATTCTCTTCATTTGAACTTGAAGTACGCAACGTGGGAGATGACCCACTAGGACAACCACCTAACAATCTTACATTGATGGCCCCAGGTCCTGGTTACACTTGTAGCCCCCTTCTTGACACTGATCCCTCAGTGTCCTCAGATTTTGGGGGACTAAGACAAGTTCCTGTTCTCAGAACTTGGAAGTCAACATGTGCATACTCCAGTTTCTTAGCAAACACATTACCGGTATGCTGTGTTTCCCTCTCATCATTTTACAACCCCATCGTCACATCTTGCCGAAATTGCAGTTGTGGATGCAGAGAAACAGATAAAAGTACTGCGTCTTGCATAAGGCCTGGTTCCTTGTCACGGTCCAATGAGGAGAACACAATTGAAGTTGTTGAATGCACCGACCACATGTGCCCAGTTCGAGTCCATTGGCATTTCAAGAACAACTATATGAACCAATGGAGAGTGAAGCTTACCATTTCTAACTACAATTACAACAAAAACTACTCAAACTGGAACTTGCTGGTCCAACATCCTGGTTTCACTCAAAAAGCATCAACCTACAGTTTCAACAGCACTAAACTTCCCACCCTCGGAATCCAAGATGGAGTTTCCCTATTTTGGGGAATAGATTATTACAACAATGAGCTATTGCATTCTGACAAGGCTCAAATGGGTGTTGTGACAACAGAAATACTATTGGACAAAGATCCAAATTCTTTCACAGTAAGTAATGGATGGGCATTTCCTAGAAGAATATATTTCAACGGCGACAACTGCGAAATGCCTTTACCTGACACGTTTCCTATGTTGCCGAATCGTAGCTCCACTTTAACACCTACTTATTCTGGTTTTACCCTCTTATTTATCCTTTTGTTTCTTCCCCTACTACTCCTTTGGCTTTGA 1317 0.4305 MVLLLPKPKLIIFFALFILSDCFDPLDPTGNISVTFDIYQRTDNGYLARVTLQNYHQYRHVEKPGWKLGWRWANNEVIWSMSGAIATDRGNCSSYSGSQMPHSCNNDPIIVDLSPEISKNRSEHCCRGGLLSAWSIDPFNAFSSFELEVRNVGDDPLGQPPNNLTLMAPGPGYTCSPLLDTDPSVSSDFGGLRQVPVLRTWKSTCAYSSFLANTLPVCCVSLSSFYNPIVTSCRNCSCGCRETDKSTASCIRPGSLSRSNEENTIEVVECTDHMCPVRVHWHFKNNYMNQWRVKLTISNYNYNKNYSNWNLLVQHPGFTQKASTYSFNSTKLPTLGIQDGVSLFWGIDYYNNELLHSDKAQMGVVTTEILLDKDPNSFTVSNGWAFPRRIYFNGDNCEMPLPDTFPMLPNRSSTLTPTYSGFTLLFILLFLPLLLLWL* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g02087 438 Pfam COBRA-like protein 46 208 IPR006918 GO:0010215|GO:0016020
Phac9g02087 438 PANTHER PROTEIN COBRA 11 417 IPR006918 GO:0010215|GO:0016020
Phac9g02087 438 PIRSF COBRA 1 438 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g02087 Phac-Chr9 19608873 19611876 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g02087 10 430 COBRA Gene Family AT3G02210 45.833 3.04e-136 397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g02087 - - vra:106760500 842.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac9g02087 9 19608873 19611876 Phac9g02087 9 19608873 19611876 ECH