Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g02084 ATGAAGAACCCCGATCTTAGAAGCTCCAAGGTCCAATCACCAAATCCCGTTCAGTTCAACTCCAAGACGCCGGAGAAACCACCGCAGCGGATCCGAAACCGTGGCGTGTCGCTCTCCGTCTCAGACATTAAAAAAGTCGGCAAGGATTTGCAGGATCGGAAGCAACGCGGTGAAACGACGTCGTCACCGTCGCAGAGCAAGAGTGTGAAGAGACAGATCTCACTGTGGCCTTCTTCTCCGAGTAAATCTAAGATTACTGACGATGATTCCTCCAAGCTTCCCGAAAAATATGAGATTTTGGATCGGTTCTTCGATCGCTTGGACACTTTAATTTCAATGTTCCGTCTGAAAGGGAAGATTCCATCTTTTACGGAAATCAGTTCTAGAATTGAATCTTTAACAGACAGGAGGTTTACTCATGGTCATCTGGCGCAGTTGAAATTTATCTTGCCTGATGCTATTGTTTTAAAGAAGGTTTCAGTGCATGATGAACGGACTAGTTGTATGAAGCCGGATATTCACGTCTCTGTAGTCCGTGAGACAGTAGAGTCTGATGTGAAGTTGTCCCCTGAACGTGCGAGAGTGTCATTGAAGAAGTTGTTTCACGCACGGCTCAGAGATTTTTGGGAATCTCATCCTGAGGGAGATGAAATTCCAGAAGGAACTCTGCCTGAGCCATTCAATCATCCAACGAAAGCCAATATTTTAGACACGTTTGACACTCGTCTCCGAACTAAATTATCACTCTGCATGCGCTATGATGACATTGTCAATAATGCAGAGTCTGTTATCATAGATGAACAAATGTCTGTACCAGTAGAAACATCAGTTGAATTGTCTAATCAGCATCTGGCAGCAGCTTCTCACTTTGCTCCATCCTTTAGAGCAAGATTTTCTTTGAAATTTAAACAAAATGGAGCGGATAATGTACAGCAAAATTCTCAAGTAGATTCAGTACAAAATTGTCCAACAATTTGTGCCTCTATCGAATCATGCAGTGTTCCCGCCCCCGCCAATACTCCAAGCAAAACAGTTGACCACACAGAATATGAAGATGGGTCTCTCTATAGCATTGATGTCATGTCAACTCCAGCAAGAAAAACCATAGAGTACATAGAAAACAAAGATGGGTCTCCCAAGAGTATTGATGCCATGTCAACTCAAGCAGAGAAAATCGCTGAATGCACAGAAAACAAAGATGTTTCTCTCAAGAGCATTGATGCCATGTCAACTCCAGTTAAACATGTTTCTACTCCAATTAGGTTGATGAGTGCCACACCTGCCTTGCGTTCACCCAAAAGATATCTTATGAGCCCAGATGACCACCCAGTCAGTTCTTTGAACAAGTTAGCTAGGCGTCCATCTCGCTCAAGGTCATTGAGATTTGACACTCCAGTGAAGAATAAGGAGGTTGTGAATGAAGACAATGCCGGTGGCTTACCAATAGATGATGATGTTTTTGACATTCTTCCAGGAAATCTTATCCAATCGATTAGAGAAAAGGAAAGAATGGCAATGGAGGAAAGAAACCCAGCTATCACTCAAGCAAAGAAACGGAAAAAATATATAGCTAACCTCCCTAAGCTCTTTGACATGATTCGCCTCTTGCTTCGACAGCGGAATTGTATTACTAAAGCTGAGCTTGTAAGCAAGATAATAACAAGCCACAGTGATATTGTTGACAGAAGTGAAGTTGAAGACCAGCTAGATTTGTTACAAGAAGTAGCACCAGAATGGATTTCTGAGAAGCAGATCTCTAGTGGGGATTTGCTATTTTTGTAA 1782 0.4254 MKNPDLRSSKVQSPNPVQFNSKTPEKPPQRIRNRGVSLSVSDIKKVGKDLQDRKQRGETTSSPSQSKSVKRQISLWPSSPSKSKITDDDSSKLPEKYEILDRFFDRLDTLISMFRLKGKIPSFTEISSRIESLTDRRFTHGHLAQLKFILPDAIVLKKVSVHDERTSCMKPDIHVSVVRETVESDVKLSPERARVSLKKLFHARLRDFWESHPEGDEIPEGTLPEPFNHPTKANILDTFDTRLRTKLSLCMRYDDIVNNAESVIIDEQMSVPVETSVELSNQHLAAASHFAPSFRARFSLKFKQNGADNVQQNSQVDSVQNCPTICASIESCSVPAPANTPSKTVDHTEYEDGSLYSIDVMSTPARKTIEYIENKDGSPKSIDAMSTQAEKIAECTENKDVSLKSIDAMSTPVKHVSTPIRLMSATPALRSPKRYLMSPDDHPVSSLNKLARRPSRSRSLRFDTPVKNKEVVNEDNAGGLPIDDDVFDILPGNLIQSIREKERMAMEERNPAITQAKKRKKYIANLPKLFDMIRLLLRQRNCITKAELVSKIITSHSDIVDRSEVEDQLDLLQEVAPEWISEKQISSGDLLFL* 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g02084 593 MobiDBLite consensus disorder prediction 433 459 - -
Phac9g02084 593 CDD Cdt1_c 489 591 IPR032054 -
Phac9g02084 593 MobiDBLite consensus disorder prediction 1 26 - -
Phac9g02084 593 Pfam DNA replication factor Cdt1 C-terminal domain 493 585 IPR032054 -
Phac9g02084 593 PANTHER DNA REPLICATION FACTOR CDT1 8 592 IPR045173 GO:0003677|GO:0030174|GO:0071163
Phac9g02084 593 MobiDBLite consensus disorder prediction 1 91 - -
Phac9g02084 593 Pfam DNA replication factor CDT1 like 93 168 IPR014939 -
Phac9g02084 593 CDD Cdt1_m 92 228 IPR014939 -
Phac9g02084 593 SUPERFAMILY "Winged helix" DNA-binding domain 89 227 IPR036390 -
Phac9g02084 593 SMART CDT1_2 93 225 IPR014939 -
Phac9g02084 593 Gene3D - 484 593 IPR038090 -
Phac9g02084 593 MobiDBLite consensus disorder prediction 57 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g02084 Phac-Chr9 19560385 19563836 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g02084 410 591 Core DNA Replication Machinery Family AT2G31270 47.449 1.23e-38 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g02084 K10727 - gmx:100778818 670.233