Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g02082 ATGAAGAACCCCGATCTTAGAAGCTCCAAGGTCCAATCACCAAATCCCGTTCAGTTCAACTCCAAGACGCCGGAGAAACCACCGCAGCGGATCCGAAACCGTGGCGTGTCGCTCTCCGTCTCAGACATTAAAAAAGTCGGCAAGGATTTGCAGGATCGGAAGCAACGCGGTGAAACGACGTCGTCACCGTCGCAGAGCAAGAGTGTGAAGAGACAGATCTCACTGTGGCCTTCTTCTCCGAGTAAATCTAAGATTACTGACGATGATTCCTCCAAGCTTCCCGAAAAATATGAGATTTTGGATCGGTTCTTCGATCGCTTGGACACTTTAATTTCAATGTTCCGTCTGAAAGGGAAGATTCCATCTTTTACGGAAATCAGTTCTAGAATTGAATCTTTAACAGACAGGAGGTTTACTCATGGTCATCTGGCGCAGTTGAAATTTATCTTGCCTGATGCTATTGTTTTAAAGAAGGTTTCAGTGCATGATGAACGGACTAGTTGTATGAAGCCGGATATTCACGTCTCTGTAGTCCGTGAGACAGTAGAGTCTGATGTGAAGTTGTCCCCTGAACGTGCGAGAGTGTCATTGAAGAAGTTGTTTCACGCACGGCTCAGAGATTTTTGGGAATCTCATCCTGAGGGAGATGAAATTCCAGAAGGAACTCTGCCTGAGCCATTCAATCATCCAACGAAAGCCAATATTTTAGACACGTTTGACACTCGTCTCCGAACTAAATTATCACTCTGCATGCGCTATGATGACATTGTCAATAATGCAGAGTCTGTTATCATAGATGAACAAATGTCTGTACCAGTAGAAACATCAGTTGAATTGTCTAATCAGCATCTGGCAGCAGCTTCTCACTTTGCTCCATCCTTTAGAGCAAGATTTTCTTTGAAATTTAAACAAAATGGAGCGGATAATGTACAGCAAAATTCTCAAGTAGATTCAGTACAAAATTGTCCAACAATTTGTGCCTCTATCGAATCATGCAGTGTTCCCGCCCCCGCCAATACTCCAAGCAAAACAGTTGACCACACAGAATATGAAGATGGGTCTCTCTATAGCATTGATGTCATGTCAACTCCAGCAAGAAAAACCATAGAGTACATAGAAAACAAAGATGGGTCTCCCAAGAGTATTGATGCCATGTCAACTCAAGCAGAGAAAATCGCTGAATGCACAGAAAACAAAGATGTTTCTCTCAAGAGCATTGATGCCATGTCAACTCCAGTTAAACATGTTTCTACTCCAATTAGGTTGATGAGTGCCACACCTGCCTTGCGTTCACCCAAAAGATATCTTATGAGCCCAGATGACCACCCAGTCAGTTCTTTGAACAAGTTAGCTAGGCGTCCATCTCGCTCAAGGTCATTGAGATTTGACACTCCAGTGAAGAATAAGGAGGTTGTGAATGAAGACAATGCCGGTGGCTTACCAATAGATGATGATGTTTTTGACATTCTTCCAGGAAATCTTATCCAATCGATTAGAGAAAAGGAAAGAATGGCAATGGAGGAAAGAAACCCAGCTATCACTCAAGCAAAGAAACGGAAAAAATATATAGCTAACCTCCCTAAGCTCTTTGACATGATTCGCCTCTTGCTTCGACAGCGGAATTGTATTACTAAAGCTGAGCTTGTAAGCAAGATAATAACAAGCCACAGTGATATTGTTGACAGAAGTGAAGTTGAAGACCAGCTAGATTTGTTACAAGAAGTAGCACCAGAATGGATTTCTGAGAAGCAGATCTCTAGTGGGGATTTGCTATTTTTCATAAACAAAATGTTGAGCCCTGAAACCATTCGAGCATCTCTTGAAGAGGCGGCATAG 1836 0.4265 MKNPDLRSSKVQSPNPVQFNSKTPEKPPQRIRNRGVSLSVSDIKKVGKDLQDRKQRGETTSSPSQSKSVKRQISLWPSSPSKSKITDDDSSKLPEKYEILDRFFDRLDTLISMFRLKGKIPSFTEISSRIESLTDRRFTHGHLAQLKFILPDAIVLKKVSVHDERTSCMKPDIHVSVVRETVESDVKLSPERARVSLKKLFHARLRDFWESHPEGDEIPEGTLPEPFNHPTKANILDTFDTRLRTKLSLCMRYDDIVNNAESVIIDEQMSVPVETSVELSNQHLAAASHFAPSFRARFSLKFKQNGADNVQQNSQVDSVQNCPTICASIESCSVPAPANTPSKTVDHTEYEDGSLYSIDVMSTPARKTIEYIENKDGSPKSIDAMSTQAEKIAECTENKDVSLKSIDAMSTPVKHVSTPIRLMSATPALRSPKRYLMSPDDHPVSSLNKLARRPSRSRSLRFDTPVKNKEVVNEDNAGGLPIDDDVFDILPGNLIQSIREKERMAMEERNPAITQAKKRKKYIANLPKLFDMIRLLLRQRNCITKAELVSKIITSHSDIVDRSEVEDQLDLLQEVAPEWISEKQISSGDLLFFINKMLSPETIRASLEEAA* 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g02082 611 MobiDBLite consensus disorder prediction 1 91 - -
Phac9g02082 611 Pfam DNA replication factor CDT1 like 93 168 IPR014939 -
Phac9g02082 611 FunFam CDT1-like protein a chloroplastic 483 611 - -
Phac9g02082 611 SMART CDT1_2 93 225 IPR014939 -
Phac9g02082 611 MobiDBLite consensus disorder prediction 433 459 - -
Phac9g02082 611 MobiDBLite consensus disorder prediction 1 26 - -
Phac9g02082 611 SUPERFAMILY "Winged helix" DNA-binding domain 89 227 IPR036390 -
Phac9g02082 611 CDD Cdt1_c 489 608 IPR032054 -
Phac9g02082 611 Pfam DNA replication factor Cdt1 C-terminal domain 493 585 IPR032054 -
Phac9g02082 611 CDD Cdt1_m 92 228 IPR014939 -
Phac9g02082 611 PANTHER DNA REPLICATION FACTOR CDT1 8 610 IPR045173 GO:0003677|GO:0030174|GO:0071163
Phac9g02082 611 Gene3D - 484 611 IPR038090 -
Phac9g02082 611 MobiDBLite consensus disorder prediction 57 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g02082 Phac-Chr9 19560385 19563836 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g02082 410 609 Core DNA Replication Machinery Family AT2G31270 48.598 2.79e-45 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g02082 K10727 - gmx:100778818 702.975