Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g02072 ATGGCCGCTTCTAATCTCTCTACCCTCTGCTCTTCTTCACACTCCAAACCCTCCTCTTTCCCTTTCTGCAACACACAAAGCTTCATCACCACCACCAACAACAATAACACTCTTTTTCTCAACAACACCAACTCCCTCCAAACCCTTCTCTCTCATTCCACTCACAACCCCCGCTACCTTCTGCCTCTCCCATGCACCAAAGCCACAAACACTTTCGCCTCCTTCGATGATGATAACGAAAAGCCCCGCGAAGAGTGCGGCGTTGTGGGCATCTACGGCGACCCAGAAGCCTCCCGTCTCTGCTCCCTCGCCCTCCACGCCCTCCAGCACCGTGGCCAGGAAGGCGCCGGCATCGTCGCCGTCCACGACAACCTCCTCCACTCCGTCAACGGAGTTGGCCTCGTTTCTGACGTCTTCGACGAGTCTAAGCTATCTCAGCTACCTGGTTCCTCCGCCATTGGCCACGTCCGCTACTCCACCGCTGGCCACTCCAAGCTGTTGAACGTCCAACCTTTCGTCGCCGGCTACCGTTTCGGCTCTGTCGCCGTCGCGCACAACGGAAACTTCGTGAACTACCGCTCCTTACGCGCCAAACTGGAAGACAACGGGTCCATCTTCAACACCACCTCCGACACCGAGGTCGTCCTACACCTGATCGCCACCTCCAAGCACAGACCTTTCTTACTCAGAATCGTTGATGCCTGCGAGAATCTGAAGGGTGCGTACTCTCTGGTGTTCCTCACGGAGGACAAGCTGGTGGCCGTGAGGGATCCCTTCGGGTTCCGACCTTTGGTGATGGGAAGGAGAAGCAACGGCGCTGTGGTTTTCGCCTCGGAGACATGCGCGCTGGATTTGATCGAAGCGACGTATGAGAGAGAGGTGAACCCAGGTGAGGTTGTGGTGGTGGACCACACTGGAATCCAATCCCTCTGCCTCGTGTCTCATCCAGAGCCAAAGCAATGTATCTTCGAGCACATATACTTCGCGCTTCCCAACTCTGTTGTCTTCGGGAAGTCTGTGTATGAGTCTAGGAGAAAATTTGGGGAAATATTGGCCACTGAGAGCCCCGTTGAATGCGACGTTGTGATCGCGGTTCCTGATTCTGGGGTGGTGGCTGCGCTTGGTTACGCTGCAAAAGCTGGGGTTCCCTTTCAGCAAGGGTTGATAAGGTCGCACTATGTCGGGAGGACTTTCATCGAGCCCTCGCAGAAAATAAGAGATTTTGGAGTGAAGCTTAAGCTGTCACCGGTGCGTGGCGTGCTTGAAGGGAAGAGGGTTGTGGTGGTGGATGATTCCATTGTGAGGGGCACCACATCGTCCAAGATTGTGAGGCTGATAAAGGAGGCGGGTGCTAAGGAGGTCCACGTGAGGATTGCGTGTCCACCCATTATTGGGTCGTGTTACTATGGTGTGGACACGCCGAGTAAGGAGGAATTGATTTCCAACAGGATGAGTGTGGAGGAAATGAGGGAGTTCATTGGGTGTGATTCCCTCGCTTTTCTTCCCTTGGATAGGTTGAAGATGTTGTTGGAGGATGATGCTCCTAACTACTGCTATGCTTGTTTCTCCGGTAAGTACCCTGTTCAGCCCGAGGAACTTGAAACCACGAGCCTCCATGAGTTTGATTGGGACAATGCTTTGGGTAATGGGAGTTTGAAACCTATCGAGGAGGAGGGTTGGGTTAGAAACCAGGAGGGAGTGTCTGAGAACAAGATTGTTAGTGTCTGA 1728 0.5382 MAASNLSTLCSSSHSKPSSFPFCNTQSFITTTNNNNTLFLNNTNSLQTLLSHSTHNPRYLLPLPCTKATNTFASFDDDNEKPREECGVVGIYGDPEASRLCSLALHALQHRGQEGAGIVAVHDNLLHSVNGVGLVSDVFDESKLSQLPGSSAIGHVRYSTAGHSKLLNVQPFVAGYRFGSVAVAHNGNFVNYRSLRAKLEDNGSIFNTTSDTEVVLHLIATSKHRPFLLRIVDACENLKGAYSLVFLTEDKLVAVRDPFGFRPLVMGRRSNGAVVFASETCALDLIEATYEREVNPGEVVVVDHTGIQSLCLVSHPEPKQCIFEHIYFALPNSVVFGKSVYESRRKFGEILATESPVECDVVIAVPDSGVVAALGYAAKAGVPFQQGLIRSHYVGRTFIEPSQKIRDFGVKLKLSPVRGVLEGKRVVVVDDSIVRGTTSSKIVRLIKEAGAKEVHVRIACPPIIGSCYYGVDTPSKEELISNRMSVEEMREFIGCDSLAFLPLDRLKMLLEDDAPNYCYACFSGKYPVQPEELETTSLHEFDWDNALGNGSLKPIEEEGWVRNQEGVSENKIVSV* 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g02072 575 CDD GPATase_N 86 336 IPR035584 -
Phac9g02072 575 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 86 309 IPR029055 -
Phac9g02072 575 Hamap Amidophosphoribosyltransferase [purF]. 85 526 IPR005854 GO:0004044|GO:0009113
Phac9g02072 575 CDD PRTases_typeI 348 459 IPR000836 -
Phac9g02072 575 SUPERFAMILY PRTase-like 321 535 IPR029057 -
Phac9g02072 575 Pfam Glutamine amidotransferase domain 169 283 IPR017932 -
Phac9g02072 575 NCBIfam amidophosphoribosyltransferase 86 527 IPR005854 GO:0004044|GO:0009113
Phac9g02072 575 Gene3D - 345 509 IPR029057 -
Phac9g02072 575 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 86 305 IPR017932 -
Phac9g02072 575 PANTHER AMIDOPHOSPHORIBOSYLTRANSFERASE 84 534 - -
Phac9g02072 575 Pfam Phosphoribosyl transferase domain 344 457 IPR000836 -
Phac9g02072 575 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 86 527 IPR029055 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g02072 Phac-Chr9 19470639 19472852 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g02072 76 562 PRT Gene Family AT2G16570 79.098 0.0 783
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g02072 K00764 - gmx:548065 871.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac9g02072 9 19470639 19472852 Phac9g02072 9 19470639 19472852 ECH