Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g02071 ATGGGCGAGGAGGAACGTGACGAAGGAGGTTCTGTCCCGGGGGTTGTTGCCGCCGACCAAACCCCGCAGGAACTCGTGTCCAGGGCCATAGCCCCCGTCAAGAAGGAATTCCTACGCCCACCTCCGGTTCGGTCTTCCGCTCCAAACGACGACGTTTCCATTCCCAACGAAAACAGGACCTCCGTTCTGGCCAAGGAGAAGAAGTCTAAGCGCCAACTCAAACGCGAACGTCGTCAGGAACAAAAGTCAGCAAAAAACCTATGTCCCGTAATTGCGAAGACGGGTGATGTTAGTTCGTGTCCTTATAAAGACAAGTGTCGGTTCAGCCATGATTTGGAAGGCTTCAAGGCGCAGAAACCGTCTGATCTAGAAGGACAATGCCCGTTCGTTAAATCTGGGGGCTCTTGCCCTTATGGCTTAGCGTGTAGATTTTCGAGCACGCATGAAGGTGGTGTGCCTTCTGGCGATTGTAATGGCCTGAAGAATAGTTCAGAGGTGAATGGATTGAGCAAGGATGTTCAAAAGCTTTTGTGGAAAAATAAGATGAGCTTCTCCAAGGCAGATGCCAAACTCAAAAGTCTCGGCCTTCTGGGACCGTCTAAGTCAAAAAGGAATGACTTGGAAAATAAAGAGGGAGTTGACACTGGTTCAAATAAGTGTGATCATTCTGATGACAGTGGCTCTTGTGTTGTTACGTCTGACTCAGGTTCTAAGTTGGAATGCCCTGCTGAAGTTATGAAAGATGATGATAATGGCATAGATGGAAAATGTGAATCTGATGAACTCTGTCCCCTGAAGCGAAGAAAAACTGAAGAAAATTGCGGTCCTAAAGAGGCAGCAAATGAAGAGAATTGTAGTCCTATGGAGGCAGAAAATGAAGGTGTTACAGAGAAAATTGTTGAAAGAAGTTGCACAAAATCTGAAGCTGAGGATATAGTCCCAGAAACTGATTTCAGCCTGAAGCTTCACTCACGTGAGAAGAAGCTTATTGATTTTAGAGGGAAGTTGTATCTGGCACCGTTAACTACTGTTGGCAATCTCCCTTTCCGGAGAGTTTGCAAAGTATTAGGTGCTGATGTAACTTGTGGTGAAATGGCAATGTGCACAAATCTTTTGCAGGGTCAAGCGTCAGAATGGGCATTGCTAAGACGTCATTCATCTGAAGATTTATTTGGTGTACAAATCTGTGGGGCATATCCAGATACTGTGGCACGAACAGTTGAACTAATAGAGCAAGAATGCACAATAGATTTTATTGATATAAATATGGGTTGCCCTATTGACATAGTTGTGAACAAGGGTGCTGGATCAGCTCTTTTAACAAAACCAATGCGGATGAAAAGTATTGTAGAAGTAGCTTCGGGTACAGTGGACAAACCAATAACTATCAAGGTACGGACTGCTTATTTTGAAGGGAAGAACCGCATTGATTCTCTGATAGCAGACATTGGCTCTTGGGGAGCCAGTGCCGTGACAATACATGGTAGGTCACGTCAACAACGCTATAGCAAGCTTGCTGACTGGGACTATGTATATCAGTGTGCCAGGAAAGCCCCAACTACGTTGCCAGTAGTGGGGAATGGAGATGTTTTTTCATTTGTGGAATGGAACAATCACAGAACTGAATGCCCTGAACTTGCTACGGACATGATTGCTCGTGGTGCACTGATTAAACCTTGGATATTTACGGAGATCAAGGAACAAAGGAATTGGGACATCAGTTCTGGCGAGCGACTAAATATTCTAAAGGATTTTGTGAATTTTGGTCTTGAACACTGGGGTTCTGACACAAAAGGGGTTGAGACCACAAGGCGGTTCTTGTTGGAATGGCTTAGCTACACTTTCAGGTATATACCTGTTGGTCTTTTGGATGTGGTTCCACAACGGTTAAACTGGCGTCCACCTTCTTACTATGGGCGTGATGAGCTTGAGACACTAATGGCCTCGGACTCTGCTGCTGATTGGGTTTATAGTTGGGGATGA 1983 0.4534 MGEEERDEGGSVPGVVAADQTPQELVSRAIAPVKKEFLRPPPVRSSAPNDDVSIPNENRTSVLAKEKKSKRQLKRERRQEQKSAKNLCPVIAKTGDVSSCPYKDKCRFSHDLEGFKAQKPSDLEGQCPFVKSGGSCPYGLACRFSSTHEGGVPSGDCNGLKNSSEVNGLSKDVQKLLWKNKMSFSKADAKLKSLGLLGPSKSKRNDLENKEGVDTGSNKCDHSDDSGSCVVTSDSGSKLECPAEVMKDDDNGIDGKCESDELCPLKRRKTEENCGPKEAANEENCSPMEAENEGVTEKIVERSCTKSEAEDIVPETDFSLKLHSREKKLIDFRGKLYLAPLTTVGNLPFRRVCKVLGADVTCGEMAMCTNLLQGQASEWALLRRHSSEDLFGVQICGAYPDTVARTVELIEQECTIDFIDINMGCPIDIVVNKGAGSALLTKPMRMKSIVEVASGTVDKPITIKVRTAYFEGKNRIDSLIADIGSWGASAVTIHGRSRQQRYSKLADWDYVYQCARKAPTTLPVVGNGDVFSFVEWNNHRTECPELATDMIARGALIKPWIFTEIKEQRNWDISSGERLNILKDFVNFGLEHWGSDTKGVETTRRFLLEWLSYTFRYIPVGLLDVVPQRLNWRPPSYYGRDELETLMASDSAADWVYSWG* 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g02071 660 Gene3D - 77 152 - -
Phac9g02071 660 CDD DUS_like_FMN 335 569 IPR035587 -
Phac9g02071 660 FunFam tRNA-dihydrouridine(47) synthase [NAD(P)(+)] 78 156 - -
Phac9g02071 660 FunFam tRNA-dihydrouridine(47) synthase [NAD(P)(+)] 331 573 - -
Phac9g02071 660 MobiDBLite consensus disorder prediction 1 85 - -
Phac9g02071 660 Pfam Dihydrouridine synthase (Dus) 338 573 IPR035587 -
Phac9g02071 660 ProSitePatterns Uncharacterized protein family UPF0034 signature. 419 437 IPR018517 GO:0008033|GO:0017150|GO:0050660
Phac9g02071 660 MobiDBLite consensus disorder prediction 203 221 - -
Phac9g02071 660 SUPERFAMILY FMN-linked oxidoreductases 335 648 - -
Phac9g02071 660 Coils Coil 63 83 - -
Phac9g02071 660 ProSiteProfiles Zinc finger C3H1-type profile. 82 113 IPR000571 GO:0046872
Phac9g02071 660 PANTHER TRNA-DIHYDROURIDINE(47) SYNTHASE [NAD(P)(+)]-LIKE 21 656 - -
Phac9g02071 660 Gene3D Aldolase class I 331 573 IPR013785 -
Phac9g02071 660 MobiDBLite consensus disorder prediction 196 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g02071 Phac-Chr9 19464338 19469800 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Phac9g02071 Dus 4.9e-49 CL0036
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g02071 K05544 - gmx:100783494 1137.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac9g02071 9 19464338 19469800 Phac9g02071 9 19464338 19469800 ECH