Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Phac9g02070 | ATGGGCGAGGAGGAACGTGACGAAGGAGGTTCTGTCCCGGGGGTTGTTGCCGCCGACCAAACCCCGCAGGAACTCGTGTCCAGGGCCATAGCCCCCGTCAAGAAGGAATTCCTACGCCCACCTCCGGTTCGGTCTTCCGCTCCAAACGACGACGTTTCCATTCCCAACGAAAACAGGACCTCCGTTCTGGCCAAGGAGAAGAAGTCTAAGCGCCAACTCAAACGCGAACGTCGTCAGGAACAAAAGTCAGCAAAAAACCTATGTCCCGTAATTGCGAAGACGGGTGATGTTAGTTCGTGTCCTTATAAAGACAAGTGTCGGTTCAGCCATGATTTGGAAGGCTTCAAGGCGCAGAAACCGTCTGATCTAGAAGGACAATGCCCGTTCGTTAAATCTGGGGGCTCTTGCCCTTATGGCTTAGCGTGTAGATTTTCGAGCACGCATGAAGGTGGTGTGCCTTCTGGCGATTGTAATGGCCTGAAGAATAGTTCAGAGGTGAATGGATTGAGCAAGGATGTTCAAAAGCTTTTGTGGAAAAATAAGATGAGCTTCTCCAAGGCAGATGCCAAACTCAAAAGTCTCGGCCTTCTGGGACCGTCTAAGTCAAAAAGGAATGACTTGGAAAATAAAGAGGGAGTTGACACTGGTTCAAATAAGTGTGATCATTCTGATGACAGTGGCTCTTGTGTTGTTACGTCTGACTCAGGTTCTAAGTTGGAATGCCCTGCTGAAGTTATGAAAGATGATGATAATGGCATAGATGGAAAATGTGAATCTGATGAACTCTGTCCCCTGAAGCGAAGAAAAACTGAAGAAAATTGCGGTCCTAAAGAGGCAGCAAATGAAGAGAATTGTAGTCCTATGGAGGCAGAAAATGAAGGTGTTACAGAGAAAATTGTTGAAAGAAGTTGCACAAAATCTGAAGCTGAGGATATAGTCCCAGAAACTGATTTCAGCCTGAAGCTTCACTCACGTGAGAAGAAGCTTATTGATTTTAGAGGGAAGTTGTATCTGGCACCGTTAACTACTGTTGGCAATCTCCCTTTCCGGAGAGTTTGCAAAGTATTAGGTGCTGATGTAACTTGTGGTGAAATGGCAATGTGCACAAATCTTTTGCAGGGTCAAGCGTCAGAATGGGCATTGCTAAGACGTCATTCATCTGAAGATTTATTTGGTGTACAAATCTGTGGGGCATATCCAGATACTGTGGCACGAACAGTTGAACTAATAGAGCAAGAATGCACAATAGATTTTATTGATATAAATATGGGTTGCCCTATTGACATAGTTGTGAACAAGGGTGCTGGATCAGCTCTTTTAACAAAACCAATGCGGATGAAAAGTATTGTAGAAGTAGCTTCGGGTACAGTGGACAAACCAATAACTATCAAGGTACGGACTGCTTATTTTGAAGGGAAGAACCGCATTGATTCTCTGATAGCAGACATTGGCTCTTGGGGAGCCAGTGCCGTGACAATACATGGTAGGTCACGTCAACAACGCTATAGCAAGCTTGCTGACTGGGACTATGTATATCAGTGTGCCAGGAAAGCCCCAACTACGTTGCCAGTAGTGGGGAATGGAGATGTTTTTTCATTTGTGGAATGGAACAATCACAGAACTGAATGCCCTGAACTTGCTACGGACATGATTGCTCGTGGTGCACTGATTAAACCTTGGATATTTACGGAGATCAAGGAACAAAGGAATTGGGACATCAGTTCTGGCGAGCGACTAAATATTCTAAAGGATTTTGTGAATTTTGGTCTTGAACACTGGGGTTCTGACACAAAAGGGGTTGAGACCACAAGGCGGTTCTTGTTGGAATGGCTTAGCTACACTTTCAGGTATATACCTGTTGGTCTTTTGGATGTGGTTCCACAACGGTTAAACTGGCGTCCACCTTCTTACTATGGGCGTGATGAGCTTGAGACACTAATGGCCTCGGACTCTGCTGCTGATTGGATACGAATATCAGAGATGTTACTTGGCAAGGTTCCTGATGGCTTTACATTTGCACCAAAGCATAAATCAAACGCTTACGATAGAGCTGAAAATGGTTAA | 2064 | 0.4501 | MGEEERDEGGSVPGVVAADQTPQELVSRAIAPVKKEFLRPPPVRSSAPNDDVSIPNENRTSVLAKEKKSKRQLKRERRQEQKSAKNLCPVIAKTGDVSSCPYKDKCRFSHDLEGFKAQKPSDLEGQCPFVKSGGSCPYGLACRFSSTHEGGVPSGDCNGLKNSSEVNGLSKDVQKLLWKNKMSFSKADAKLKSLGLLGPSKSKRNDLENKEGVDTGSNKCDHSDDSGSCVVTSDSGSKLECPAEVMKDDDNGIDGKCESDELCPLKRRKTEENCGPKEAANEENCSPMEAENEGVTEKIVERSCTKSEAEDIVPETDFSLKLHSREKKLIDFRGKLYLAPLTTVGNLPFRRVCKVLGADVTCGEMAMCTNLLQGQASEWALLRRHSSEDLFGVQICGAYPDTVARTVELIEQECTIDFIDINMGCPIDIVVNKGAGSALLTKPMRMKSIVEVASGTVDKPITIKVRTAYFEGKNRIDSLIADIGSWGASAVTIHGRSRQQRYSKLADWDYVYQCARKAPTTLPVVGNGDVFSFVEWNNHRTECPELATDMIARGALIKPWIFTEIKEQRNWDISSGERLNILKDFVNFGLEHWGSDTKGVETTRRFLLEWLSYTFRYIPVGLLDVVPQRLNWRPPSYYGRDELETLMASDSAADWIRISEMLLGKVPDGFTFAPKHKSNAYDRAENG* | 688 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Phac9g02070 | 687 | SUPERFAMILY | FMN-linked oxidoreductases | 335 | 648 | - | - | |
Phac9g02070 | 687 | Pfam | Dihydrouridine synthase (Dus) | 338 | 573 | IPR035587 | - | |
Phac9g02070 | 687 | PANTHER | TRNA-DIHYDROURIDINE(47) SYNTHASE [NAD(P)(+)]-LIKE | 21 | 681 | - | - | |
Phac9g02070 | 687 | CDD | DUS_like_FMN | 335 | 569 | IPR035587 | - | |
Phac9g02070 | 687 | MobiDBLite | consensus disorder prediction | 1 | 85 | - | - | |
Phac9g02070 | 687 | ProSitePatterns | Uncharacterized protein family UPF0034 signature. | 419 | 437 | IPR018517 | GO:0008033|GO:0017150|GO:0050660 | |
Phac9g02070 | 687 | Gene3D | Aldolase class I | 331 | 573 | IPR013785 | - | |
Phac9g02070 | 687 | MobiDBLite | consensus disorder prediction | 203 | 221 | - | - | |
Phac9g02070 | 687 | Coils | Coil | 63 | 83 | - | - | |
Phac9g02070 | 687 | ProSiteProfiles | Zinc finger C3H1-type profile. | 82 | 113 | IPR000571 | GO:0046872 | |
Phac9g02070 | 687 | FunFam | tRNA-dihydrouridine(47) synthase [NAD(P)(+)] | 78 | 156 | - | - | |
Phac9g02070 | 687 | Gene3D | - | 77 | 152 | - | - | |
Phac9g02070 | 687 | MobiDBLite | consensus disorder prediction | 196 | 225 | - | - | |
Phac9g02070 | 687 | FunFam | tRNA-dihydrouridine(47) synthase [NAD(P)(+)] | 331 | 573 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Phac9g02070 | Phac-Chr9 | 19464338 | 19469800 | Tandem |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C3H | Phac9g02070 | Dus | 5.4e-49 | CL0036 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Phac9g02070 | K05544 | - | gmx:100783494 | 1201.42 |