Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g02046 ATGGAGGTAGCAGTGGCCAAAGCGTTGAAACCGAGTTTAAGGGGAGAGTTCATCGTTCAGCAAACACACTGCGAGGATTTTTTCTGTCTCAACGCCAACACCGTCGTCGGAGGCGACGATTTCTTCGTCGACGACCTATTTGACTTCTCAGACGGCTCTCTTCACTACGAACAACAAGATTGCGTCGAAGAAAAAAAAAGTTTATCGGCTTCGTCGCAGTCAAAGGACCTAGGAGAAGACGATAGCAACTCCAATTCCACCGGCGTTTCCTATGATTCACTTTTCTCTGCCGAATTAGCCGTTCCGGCCGGTGATTTGGAGGACCTAGAGTGGGTTTCACACTTTGTTGACGATTCTCTCCCGGAGCTGTCACTTTTATACCCGGTTCGTTCGGAGGAAGTAAACCGGCGGGTTGAACCGGAACCCTCGGCGAAGAAAACGCCTCGTTTTCCGTGTGAAATGAAAATAACGACCAAGGCGAGAACTGTACGGAATAGAAAGCCCAACGCTCGCGTGTGGTCGTTGGGCCCGTTGCTCTCGCTCCCGTCCTCGCCGTCTTCGTGCTCTTCTTCTGTGACGGAGCCACCCGCGAAAAAGCAGAAGAAGCGGGCCGAGGCCCAGCCGGTTGGGGCCCAGGTTCAGCGGCGGTGCAGTCACTGTCAGGTGCAGAAGACGCCGCAGTGGAGGACGGGCCCCCTGGGCGCCAAAACCCTCTGCAACGCGTGCGGGGTTCGGTACAAATCGGGTCGGCTTTTTTCGGAGTACAGACCGGCTTGTAGCCCAACCTTCTGCAGCGATATTCACTCCAATAGTCACCGGAAAGTGTTGGAGATTCGCAAGAAGAAAGAGGTGGCTGGGCCGGACACCGGTTCAGCCCAGGCCCAAATGGTTCCCACCTGCTGA 903 0.5504 MEVAVAKALKPSLRGEFIVQQTHCEDFFCLNANTVVGGDDFFVDDLFDFSDGSLHYEQQDCVEEKKSLSASSQSKDLGEDDSNSNSTGVSYDSLFSAELAVPAGDLEDLEWVSHFVDDSLPELSLLYPVRSEEVNRRVEPEPSAKKTPRFPCEMKITTKARTVRNRKPNARVWSLGPLLSLPSSPSSCSSSVTEPPAKKQKKRAEAQPVGAQVQRRCSHCQVQKTPQWRTGPLGAKTLCNACGVRYKSGRLFSEYRPACSPTFCSDIHSNSHRKVLEIRKKKEVAGPDTGSAQAQMVPTC* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g02046 300 ProSitePatterns GATA-type zinc finger domain. 217 242 IPR000679 GO:0006355|GO:0043565
Phac9g02046 300 ProSiteProfiles GATA-type zinc finger domain profile. 211 247 IPR000679 GO:0006355|GO:0043565
Phac9g02046 300 MobiDBLite consensus disorder prediction 65 86 - -
Phac9g02046 300 PANTHER GATA TRANSCRIPTION FACTOR 28 294 - -
Phac9g02046 300 PIRSF Txn_fac_GATA_plant 16 299 IPR016679 GO:0003677|GO:0005634|GO:0045893
Phac9g02046 300 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 211 272 - -
Phac9g02046 300 MobiDBLite consensus disorder prediction 181 195 - -
Phac9g02046 300 MobiDBLite consensus disorder prediction 181 210 - -
Phac9g02046 300 FunFam GATA transcription factor 207 294 - -
Phac9g02046 300 CDD ZnF_GATA 216 273 IPR000679 GO:0006355|GO:0043565
Phac9g02046 300 Gene3D - 210 261 IPR013088 GO:0006355|GO:0008270
Phac9g02046 300 SMART GATA_3 211 265 IPR000679 GO:0006355|GO:0043565
Phac9g02046 300 Pfam GATA zinc finger 217 250 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g02046 Phac-Chr9 19125125 19127104 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g02046 40 287 C2C2-Gata Transcription Factor Family AT4G36240 44.106 2.08e-54 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Phac9g02046 GATA 9.4e-16 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g02046 - - gmx:100780311 478.404