Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g02040 ATGAAGATCCAGTGTGACGTGTGTGACAAAATGGAAGCCACAGTCTTCTGTCCTGCAGATGAAGCTGCTCTTTGCCGTAGCTGCGATCGCACCATTCACCACGCCAACAAGCTTGCAACCAAACACCCTCGCTTCTCTCTCATCTTCCCCACCTCCCAAGACTTCCCTCTTTGTGATATCTGCCAAGAGAAGCGTGCATATCTATTTTGCCAAGAGGACAGGGCATTGCTGTGCAGGGAATGTGACCTTCCAATCCACATAGCGAATGAGCATACGCAGAAGCATAACAGGTTTCTTCTCACGGGTGTGAAGCTCTCGGCCACTTCTTTGGATTCTGCTTCCTCTTCCACCAATTGCACCGATAAAGTCACTGCCTCTGAAGGAAAAAACGCTCGATCTAGAATCAACAGACCCAGATCAATTTCCCATGAAAATCTCACCTCTTCTTGCAAGGCTGAAGACAACGTGGGCAGCGACACTGGTTCGGTTTCAACCAGCAGCATTTCTGAGTATTTGATCGAGACAATACCCGGTTACTGTTTCGAAGAACTCCTTGATGGTTCATTTGCACCTACTAATGGTTTCTAA 588 0.4779 MKIQCDVCDKMEATVFCPADEAALCRSCDRTIHHANKLATKHPRFSLIFPTSQDFPLCDICQEKRAYLFCQEDRALLCRECDLPIHIANEHTQKHNRFLLTGVKLSATSLDSASSSTNCTDKVTASEGKNARSRINRPRSISHENLTSSCKAEDNVGSDTGSVSTSSISEYLIETIPGYCFEELLDGSFAPTNGF* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g02040 195 Pfam B-box zinc finger 56 92 IPR000315 GO:0008270
Phac9g02040 195 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 186 - -
Phac9g02040 195 CDD Bbox1_BBX-like 5 47 - -
Phac9g02040 195 CDD Bbox1_BBX-like 57 100 - -
Phac9g02040 195 ProSiteProfiles Zinc finger B-box type profile. 53 100 IPR000315 GO:0008270
Phac9g02040 195 SMART bboxneu5 4 47 IPR000315 GO:0008270
Phac9g02040 195 SMART bboxneu5 53 100 IPR000315 GO:0008270
Phac9g02040 195 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Phac9g02040 195 Gene3D Classic Zinc Finger 1 101 - -
Phac9g02040 195 FunFam B-box zinc finger protein 21 1 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g02040 Phac-Chr9 19054678 19056257 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g02040 1 195 C2C2-CO-like Transcription Factor Family AT1G75540 51.220 4.82e-63 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBB Phac9g02040 zf-B_box 3.3e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g02040 - - gmx:100800981 308.531