Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g02039 ATGAAAAGAGGAACACAAGGCGAAGAAGAAGTAGTTTCAAGGGGTTCCAAGTGCCAAGACTGTGGGAACCAAGCCAAGAAGGAGTGTTCATATTCAAGGTGCAGAACTTGTTGCAAGAACAAAGGGTTTCAGTGCCAAACCCATATCAGGAGTACTTGGACTCCTGTGGATAAGAGGCGCAACACGGAGCAACCACCTTCACCTCCACCACACAACTTTCATGGAGATATTCCTCAAAAGCACAACGAGATCAATCCCTATTCAGTTTCAGGTTTAGAGATGAAATTTCCCGGTGCTGCGAATTCGATGGCTATGTTTCGGTGCGTTCAGGTTCGGTCTATGGATGATGCGATTAATGAAGTAGCGTATCAAACATCTGTGAATATTGGGGGGCATGTATTCAGTGGAATACTATATGATCAAGGCCCCGAACAAGGGTATAATAATAAGGGTGAGAGTTCCAGTGGCGTTGTTGATGAACAGCTGAATAATAATCTTGGTCTTATGAATAATGCTTCAATCCAGAGTAGAGATAGTAGTGGTGTAACTATAGCCTCTGCTGGTCATGGAGAACCTCTTTTTCCTCCACCACCATATCCGTTTCCCCTTGCTTCCTTCAGACCCGGTATGCCATATTTCACATACCCAAGATCTTAA 657 0.4429 MKRGTQGEEEVVSRGSKCQDCGNQAKKECSYSRCRTCCKNKGFQCQTHIRSTWTPVDKRRNTEQPPSPPPHNFHGDIPQKHNEINPYSVSGLEMKFPGAANSMAMFRCVQVRSMDDAINEVAYQTSVNIGGHVFSGILYDQGPEQGYNNKGESSSGVVDEQLNNNLGLMNNASIQSRDSSGVTIASAGHGEPLFPPPPYPFPLASFRPGMPYFTYPRS* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g02039 218 MobiDBLite consensus disorder prediction 1 15 - -
Phac9g02039 218 NCBIfam LRP1 C-terminal domain 95 143 IPR006511 -
Phac9g02039 218 NCBIfam putative zinc finger domain, LRP1 type 17 59 IPR006510 -
Phac9g02039 218 MobiDBLite consensus disorder prediction 56 84 - -
Phac9g02039 218 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 10 174 IPR007818 GO:0003700|GO:0006355
Phac9g02039 218 MobiDBLite consensus disorder prediction 1 25 - -
Phac9g02039 218 Pfam Domain of unknown function (DUF702) 15 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g02039 Phac-Chr9 19041098 19042366 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g02039 18 218 C2H2 Transcription Factor Family AT3G51060 41.991 1.17e-44 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Phac9g02039 DUF702 3.4e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g02039 - - pvu:PHAVU_009G004300g 423.705