Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g02031 ATGGCAACTTACTACCCATGTTCAAGTAATCAAAGGGGTGCTGTGCCTATTCTGTGTCTTAGGGAGCCTTTGCATAATTTGTATCCAGAGACACCAATTTTGCCCAGCAATATGACAGTGTATACGAACTCCGGTTCATATTCTGAAGCATTGCCCGGAAATTCTCAGCAGCAAAACAATTGCTTTGTGATTCCATCACCGTCAGTAGGTGCTTCAAATTCCACAGTTGAGCAGCAAGAAATATTGGCTAATATTGGTGGATACCCAATTGGGGTTCATGATTTCAGTGCATGGAGGGATGGTAGAAGTGAGATGTTGGTCAGACAATCTATGGATGGACAGAACTTGCAAGGTCAGGGATTATCTCTAAGCCTTGGAACCCACATGCCCTCAGGAATTCAACTGCCTTCTGTTCATGATAGGAATCATTGCTCAAATTTTGATTCGTTTTTGGGTGCAAATCCATCACTTTCAGCCAACGAGGTCTACCAAAATGGCTCGTCTAGGGATGCGGGTACGAGACATTCTGAAAGTTTTCCTCCTGTGTTACATGAAGCTGGTCATTATTTGAACAAAGCAGATTTTTCATTTCATGGAATTTCTAGTGCTGGAAGAACAGTTCCTAGCTCCAAATATCTCAAGGCAGTGCAACAACTGCTTGATGAAGTTGTTGATATCCGACAAGCTATTAAAAGACCTGAAACGAGAAGTTACGGAACACATGAGAACTCTACGAAGAATTCGAAGGAGGGTGATGAGCATCTATTAAATGAACGGTCTTCTGTAAATGTTGTGCCAAATTCTCAAGGCTCAGCCAGTAACTCCTCTTGTGAGCTTTCACATGCTGAAAAACAAGATCTGCACAAGAAGTTAGCAAAGCTTCTGTCAATGTTGGATGAGGTTGACAGTAGGTACAAACAATATTACCAGAAAATGCAGAATGTGGTGTCATCATTTGATGTGGTAGCAGGATGTGGGGCAGCTAAACCATACACGGCCCTTGCTCTACAAACCATTTCATGCCATTTTCGGTGTTTGCGTGATGCAATTACTGGTCAAATTCGTGCAACACGAAAGAGCCTTGGGGAGCATGATGCTTCTGGAAGTAATAAAGGAGTTGGAATGGCAAGACTAAAGTATGTGGACCATCAAGTCCGACAACAGAGGGCTATTCAGCAGCTTGGTATGATGCAGCATGCATGGAGACCGCAAAGGGGGCTTCCAGAAAGCTCTGTTTCAATTCTTCGCGCATGGCTTTTTGAGCATTTCCTTCATCCATATCCGAAGGATTCCGAGAAGACCATGCTAGCAAGACAGACGGGCTTGACCAGAAGTCAGGTCTCAAATTGGTTTATAAATGCACGTGTGCGTCTATGGAAGCCTATGATTGAGGATATGTACAAGCAAGATGTTTCTGATGCGGACATGGACTCAACTTCTTCATCTGAAAATGTCTCCAAGGCAACAAAAAGTGATGTCAAGATCTCCAATGATACGGGTGATTCACAGCACTGTCAGAGTCCAATAGTAACTGATACAAATCACAGTGGTGGACAAGCTAAGGACCTTGGATATGATCAGGTTCTTGGTACAAAAATCATGGCATCCACTGGATTAACTAGTCTCATTAGTGGAGGTCATGAGGTTGAAACCGAACACGGGTCAGGAAAGCAGAATGGGGAGAAAAGGCCAAATTTGGATGATTGTGGTCTCTTCTCTGATAACATGGTTGTTCAGTCTGATGGAGCTACTAATGACAGGTTTGTAGCAGTTGGTCCAACGTGCCAAATGTCAGAGTTTGAGAGGTTCAAGTCAGGAAGTGGAGTGTCTCTAACATTGGGTTTACAGTATTGTGAAGGAGGAAATTATTTGCCTGGTGAGACCCATCTCAGTTTGGTTTCCATGAGGGAAAATGGCATCTACAGCAGCGCAGCTGCAGATTCTACAGTTGGAGTACAGACAGCAGAACTTGAGTGCGTTGGTGCTGGAAACCAGCGACAAAGGTTCAGTTCACCTCATATGTTACATGATTTTGTGGTATAA 2043 0.4361 MATYYPCSSNQRGAVPILCLREPLHNLYPETPILPSNMTVYTNSGSYSEALPGNSQQQNNCFVIPSPSVGASNSTVEQQEILANIGGYPIGVHDFSAWRDGRSEMLVRQSMDGQNLQGQGLSLSLGTHMPSGIQLPSVHDRNHCSNFDSFLGANPSLSANEVYQNGSSRDAGTRHSESFPPVLHEAGHYLNKADFSFHGISSAGRTVPSSKYLKAVQQLLDEVVDIRQAIKRPETRSYGTHENSTKNSKEGDEHLLNERSSVNVVPNSQGSASNSSCELSHAEKQDLHKKLAKLLSMLDEVDSRYKQYYQKMQNVVSSFDVVAGCGAAKPYTALALQTISCHFRCLRDAITGQIRATRKSLGEHDASGSNKGVGMARLKYVDHQVRQQRAIQQLGMMQHAWRPQRGLPESSVSILRAWLFEHFLHPYPKDSEKTMLARQTGLTRSQVSNWFINARVRLWKPMIEDMYKQDVSDADMDSTSSSENVSKATKSDVKISNDTGDSQHCQSPIVTDTNHSGGQAKDLGYDQVLGTKIMASTGLTSLISGGHEVETEHGSGKQNGEKRPNLDDCGLFSDNMVVQSDGATNDRFVAVGPTCQMSEFERFKSGSGVSLTLGLQYCEGGNYLPGETHLSLVSMRENGIYSSAAADSTVGVQTAELECVGAGNQRQRFSSPHMLHDFVV* 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g02031 680 ProSiteProfiles 'Homeobox' domain profile. 398 461 IPR001356 GO:0003677
Phac9g02031 680 MobiDBLite consensus disorder prediction 473 520 - -
Phac9g02031 680 MobiDBLite consensus disorder prediction 234 280 - -
Phac9g02031 680 MobiDBLite consensus disorder prediction 260 280 - -
Phac9g02031 680 SUPERFAMILY Homeodomain-like 402 467 IPR009057 -
Phac9g02031 680 MobiDBLite consensus disorder prediction 547 566 - -
Phac9g02031 680 Gene3D - 397 475 - -
Phac9g02031 680 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 124 484 - -
Phac9g02031 680 SMART prehox3 201 352 IPR006563 -
Phac9g02031 680 Pfam Homeobox KN domain 418 457 IPR008422 GO:0003677|GO:0006355
Phac9g02031 680 SMART HOX_1 401 465 IPR001356 GO:0003677
Phac9g02031 680 MobiDBLite consensus disorder prediction 550 566 - -
Phac9g02031 680 CDD homeodomain 401 462 IPR001356 GO:0003677
Phac9g02031 680 MobiDBLite consensus disorder prediction 234 257 - -
Phac9g02031 680 Pfam Associated with HOX 207 351 IPR006563 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g02031 Phac-Chr9 18996695 19000809 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g02031 28 680 Homeobox Transcription Factor Family AT4G34610 39.910 1.42e-125 381
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Phac9g02031 POX 1.4e-47 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g02031 - - vra:111240485 1195.26