Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g02029 ATGTCGAACGAGCCAGATGAAGCTACACGACGTCGTTCGGCGGAGGCTGAGTATCGCAAGAAGCTTGACTTTCGCAATTATATGAGAGCCCTTGTTCCATTTGGCAGACCGTATGAGAAGTTCTTAAAGAGGCATCTTGCGCAAACTGAGCAAGAACTCAGTTACTTGAAGGGTGCTGGCTTTATCGTTGGTCATGTTCTAAGCTCCAATCACAGTGAACGCTTTGTTGTAGAAACAAGAGTTCGATCTAGATATTTAGTTGGCTGTGATAGTAAGTTGGACACGAAGAAGATAACTAAAGGAACAAGAGTTTTCCTGGAGAAGACGACGTTGACCATCATGGGAATTCTTCCCCGCCAAGTTGAACGTGAGGTACAAAATATGATTGTTGAAGACTCGGTAAACGTTAGTTACGCTGCACTAGGAGGGCTTTCAGATCAGATTCGAGAACTCAGGGAGTCGATAGAATTGCCTTTAGTGAATCCTGAGATTTTTCAAAAGGTTGGAATCAGACCCCCCAAGGCTGTTCTTCTTTATGGACCTCCTGGAACTGGGAAGACACTCTTAGCGAGAGCAATAGCCAGCAATGTCGATGCTAAATTCTTGAATATTATAACTAGTGCTCTTTCGGTTAAATTTCCTGGTGAAGGCTCAGTATTAATTAGAGCAATGTTTAGATATGCACGCGATAATCAGCCTTGCATCATATTCATGGATGAGATTGATGGCACGGTGAAAGTCATTATGGCTACAAATAGGCGTGATATACTTGATCCAGCCCTTCTTCGTGCGGGTCGACTTGATAGGCAAATAAAAATACCATTACCAAATAACCACGCAAGGATGCAAATCCTCCAAATCCATGCTGCTGGAATTGCAAAACAGGGCGAAATTGACTATGAAGCAGTTGTTAATATGTCTCAGGGATTCAATGGTGCTGATCTTCGTAATGTTTGCACTGAAGCTGGTATGTTAGCTATTCGTGCCGACCGTGTGATTATGCGATTAACATAG 1014 0.431 MSNEPDEATRRRSAEAEYRKKLDFRNYMRALVPFGRPYEKFLKRHLAQTEQELSYLKGAGFIVGHVLSSNHSERFVVETRVRSRYLVGCDSKLDTKKITKGTRVFLEKTTLTIMGILPRQVEREVQNMIVEDSVNVSYAALGGLSDQIRELRESIELPLVNPEIFQKVGIRPPKAVLLYGPPGTGKTLLARAIASNVDAKFLNIITSALSVKFPGEGSVLIRAMFRYARDNQPCIIFMDEIDGTVKVIMATNRRDILDPALLRAGRLDRQIKIPLPNNHARMQILQIHAAGIAKQGEIDYEAVVNMSQGFNGADLRNVCTEAGMLAIRADRVIMRLT* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g02029 337 PANTHER 26S PROTEASOME REGULATORY SUBUNIT 42 242 - -
Phac9g02029 337 Pfam ATPase family associated with various cellular activities (AAA) 245 275 IPR003959 GO:0005524|GO:0016887
Phac9g02029 337 Pfam ATPase family associated with various cellular activities (AAA) 176 244 IPR003959 GO:0005524|GO:0016887
Phac9g02029 337 FunFam Cell division control protein 48 homolog E 137 210 - -
Phac9g02029 337 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 137 329 IPR027417 -
Phac9g02029 337 Gene3D - 245 275 IPR027417 -
Phac9g02029 337 Pfam AAA+ lid domain 298 330 IPR041569 -
Phac9g02029 337 Pfam Proteasomal ATPase OB C-terminal domain 70 118 IPR032501 -
Phac9g02029 337 SMART AAA_5 172 277 IPR003593 GO:0016887
Phac9g02029 337 Gene3D - 37 132 IPR012340 -
Phac9g02029 337 Gene3D - 135 243 IPR027417 -
Phac9g02029 337 Gene3D - 276 329 - -
Phac9g02029 337 ProSitePatterns AAA-protein family signature. 245 263 IPR003960 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g02029 Phac-Chr9 18990856 18993175 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g02029 98 328 Calmodulin-binding Proteins AT3G56690 31.698 1.69e-29 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g02029 K03064 - pop:7477634 399.438