Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g01980 ATGGCTTCTGCAGAAATTGAGTTCCGATGCTTTGTTGGTGGGCTTGCTTGGGCCACTGACAGCGAAGCTCTTGACAAAGCCTTCTCAAAGTATGGCCAGATCATCGAATCGAAGGTCATCAACGATCGCGAAACTGGAAGATCAAGAGGGTTTGGATTTGTGACCTTCGCCACGGAACAGGCGATGAGAGACGCTATCGAAGGTATGAACGGCCAGAACCTCGACGGCCGTAACATCACCGTCAACGAGGCTCAGTCTCGTGGGAGAGGCGGTGGCGGTGGTGGTGGTTATGGAGGCGGCGGCGGCGGTGGATATGGCGGTGGTGGCGGTGGAGGAGGATATGGCCGAGGTGGTGGAGGAGGTAGTTACGGTGGAGGCGGCAGACGTGAAGGTGGTTATAACCGTAATGGTGGTGGTGGAGGTTATGGTGGCGGTGGTGGTGGATACGGTGGTGGTGGTTATGGAGGTGGAAGAGACCGTGGATATGGCGATGGTGGGTCCCGCTATTCGAGAGGAGGTGGTGCTTCGGATGGTGGAAGCTGGAGAAATTAG 552 0.5652 MASAEIEFRCFVGGLAWATDSEALDKAFSKYGQIIESKVINDRETGRSRGFGFVTFATEQAMRDAIEGMNGQNLDGRNITVNEAQSRGRGGGGGGGYGGGGGGGYGGGGGGGGYGRGGGGGSYGGGGRREGGYNRNGGGGGYGGGGGGYGGGGYGGGRDRGYGDGGSRYSRGGGASDGGSWRN* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g01980 183 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED 9 169 - -
Phac9g01980 183 SUPERFAMILY RNA-binding domain, RBD 8 118 IPR035979 GO:0003676
Phac9g01980 183 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 8 86 IPR000504 GO:0003723
Phac9g01980 183 MobiDBLite consensus disorder prediction 149 183 - -
Phac9g01980 183 SMART rrm1_1 9 82 IPR000504 GO:0003723
Phac9g01980 183 Gene3D - 2 106 IPR012677 -
Phac9g01980 183 CDD RRM2_NsCP33_like 9 84 - -
Phac9g01980 183 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 11 79 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g01980 Phac-Chr9 18666862 18668225 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g01980 10 88 Eukaryotic Initiation Factors Gene Family AT2G23350 34.177 3.81e-06 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g01980 - K13195 gmx:100777821 163.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac9g01980 9 18666862 18668225 Phac9g01980 9 18666862 18668225 ECH