Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g01979 ATGGGGATAGTGTGGTTTGGGTTGTTGTTGTTGCTGGTGGTGAGTCAGGTGACACTGGAACAGATTGAGCCACTGAGTTCCTCTGAGGAGCGAGAATCGTTACTTGAACTGAGGGCTTCTCTGGGGTTGAGGAGCAAGGAATGGCCAAGAAAACCAGACCCTTGTTTACTCTGGGTTGGCATCACATGCCAGAATGGTCGAGTCGTTGGGATCAATATCTCTGGGTTTAAAAGAACCCGAATTGGTAGGAGGAACCCGCAATTTGCAGCGGATGCTTTGGCCAATTTCACTCTCTTGCAGTCCTTCAATGCCTCCAATTTCCTCCTTCCTGGCCCTATTCCTGATTGGTTTGGTCTCTCCCTTCCTTCTCTCAGAGTGCTTGATCTTCGTTCTTGCTCCATTGTTAATGCTATTCCCTTCACTCTTGGCAATTTGACCAACCTCACTAGTCTCTATCTCTCTGACAACAACCTCAATGGGAATATTCCCGAGTCTTTGGGTCAACTCTCTGCCCTTTCGGTTCTTGATCTTTCCAGGAATTCTCTTACTGGCTCCATACCAACGTCTTTTGCCTTTCTTGGGAATCTTTCCTCCCTTGACATGTCTGCCAATTTTTTGTTGGGGCCGATTCCCCCTGGCATAGGGTCTCTTTCCAGGTTACAGTACTTGAATCTTTCCAACAATGGACTTGCATCTTTGCCTGCTCAATTGGGGGGTCTAACCAGCTTAATTGTCCTTGATCTTAGTCAGAATTCTTTTGCCAGTGGCGGACTGCCTCTGGATTTGGTTGGGCTGAGGAACTTGCAGCAGATGATACTCACAAACAGCATGCTCACCGGAGTTCTGCCGGGGAGATTGTTTACTGGTTCATTGCAGTTGCAGTTCCTAGTACTGAGGCAGAACAATTTTAGTGGTTCTTTGCCTGTTGAGTTGTTGTCTCTGCCAAGATTGAGCTTCCTTGATGTGTCTGCAAATAATTTCAGCGGTCTGCTTCCTAATTCGAGTTTGGCTGCTAATGCTACTGTTGCGGTGCTCAATATTTCGCACAATAAGTTTTATGGAGGCCTCACTACTGCTCTAAGAAGGTTTGAGTTTGTTGATCTTTCAAACAATTATTTTGAGGGCAAGGTTCTGGATTTCATGCATAATGCGTCTCTAGATAGCAACTGTCTCCAGAACGCCACAAATCAGAGGTCAACGGTGGAATGTACATCATTTTATGCAGAGAGGGGGCTAAATTTTGATAATTTTGGACACCCGAATACAACAAACCCTCCTGCCTCCGAAAGCTCTGGAAAGAGCAATAAAACTAAGGTTATACTGGCAGCAGTCTTGGGTGGATTGGGTTTAATTGCACTCTTGGTGTTGCTAGTGGTTCTGTTGCTTCTGTGTGCTCGTAAGAGGGGTAATTCAAATCAGAGAGGAAACGGTGTCGGTCCTGCTCCTGTTGGCAGCAGTCCTCCAAACCCTGGTGTACCAATCCAATTTCCAAATGTAGGTGACTCATTTACATATCATCAGTTGCTCCAGGCAACTGGAGATTTCAATGATGTAAATCTTATCAAACATGGCCACACTGGGGACTTCTTCAATGGTGTTTTGGAGAGTGGGATTCCTGTCATCATCAAAAGAATCGACACGCGTTCAGCTAGAAAGGAGGCTTATCTGTCGGAGTTGGACTTCTTCAATAAGGTTTCTCATCAGAGATTTGTTCCATTTTTAGGTCATTGTTTAGAAAATGAGAATGAGAAGTTTCTGGTTTATAAAAATATGCCAAATGGGGACTTGTCTAATTGCTTGTACTACAAAAAGACTACATCTGAAGATGGTACTTTGCAATCACTGGACTGGATAACCAGGTTAAAAATTGCTACTGGAGCCGCAGAGGCCCTGTCGTATCTACATCATGAATGTATGCCACCCATTGTTCACAGGGATATTCAAGCAAGCAGTATACTTCTTGACGACAAATACGAAGTTCGGTTGGGTAGTCTAAGTGAAGCCTGTGCTCAAGAAGGTGAAATTCATCAAAGTAAGATCACCAGGTTTCTGCGGTTGCCTCAGTCCTCTGACCAAGGCCCATCTGGTTATTCAACAACAATTTGTGCGTATGACGTTTATTGCTTTGGAAAAGTTTTACTTGAACTGGTGACTGGTAGGGTGGGAATGAGTGCAGCCAGCGACGCGGAAGTAAAGGAATGGTTTGATCTGATTCTACCTTGTATTAATATGTATGAGAAGGAGCTTGTGACGAAGATTGTGGATCCATCGATGGTTGTTGACGATGATTTCCTAGAGGAAGTATGGGCTATAGCCATTGTTGCCAGGTCTTGCTTAAATCCCAAACCTTCAAGGAGACCCCCAATGAGATATATTCTGAAGGCTTTGGAAAACCCTTTGAAGGTGGTGAGGGAAGAAAACTCCAGTTCTGCGCGGCTAAGAGCAACCTCTTCTAGAGGTTCTTGGAATGCTGCTACTTTGTTTGGGAGTTGGCGTCAGAGTTCTTCTGATGTAACAACAACAACTCCAGCAGCCTCTGGTATAAAACTAGATAGAGGTGGTAGTTTAAAACTGTCAGGAACTACTGGGTCGCAGTCACAGGGTAGTTTCCACAATGGCGGTGAGATTTCGTTGTCACGGAGACGACACTCGAAGGAGATATTCCCAGAGCCATCAGGAATTCATGATGTAGAGAGGTTGGAGCTGGAATAG 2712 0.4499 MGIVWFGLLLLLVVSQVTLEQIEPLSSSEERESLLELRASLGLRSKEWPRKPDPCLLWVGITCQNGRVVGINISGFKRTRIGRRNPQFAADALANFTLLQSFNASNFLLPGPIPDWFGLSLPSLRVLDLRSCSIVNAIPFTLGNLTNLTSLYLSDNNLNGNIPESLGQLSALSVLDLSRNSLTGSIPTSFAFLGNLSSLDMSANFLLGPIPPGIGSLSRLQYLNLSNNGLASLPAQLGGLTSLIVLDLSQNSFASGGLPLDLVGLRNLQQMILTNSMLTGVLPGRLFTGSLQLQFLVLRQNNFSGSLPVELLSLPRLSFLDVSANNFSGLLPNSSLAANATVAVLNISHNKFYGGLTTALRRFEFVDLSNNYFEGKVLDFMHNASLDSNCLQNATNQRSTVECTSFYAERGLNFDNFGHPNTTNPPASESSGKSNKTKVILAAVLGGLGLIALLVLLVVLLLLCARKRGNSNQRGNGVGPAPVGSSPPNPGVPIQFPNVGDSFTYHQLLQATGDFNDVNLIKHGHTGDFFNGVLESGIPVIIKRIDTRSARKEAYLSELDFFNKVSHQRFVPFLGHCLENENEKFLVYKNMPNGDLSNCLYYKKTTSEDGTLQSLDWITRLKIATGAAEALSYLHHECMPPIVHRDIQASSILLDDKYEVRLGSLSEACAQEGEIHQSKITRFLRLPQSSDQGPSGYSTTICAYDVYCFGKVLLELVTGRVGMSAASDAEVKEWFDLILPCINMYEKELVTKIVDPSMVVDDDFLEEVWAIAIVARSCLNPKPSRRPPMRYILKALENPLKVVREENSSSARLRATSSRGSWNAATLFGSWRQSSSDVTTTTPAASGIKLDRGGSLKLSGTTGSQSQGSFHNGGEISLSRRRHSKEIFPEPSGIHDVERLELE* 904
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g01979 903 FunFam Putative LRR receptor-like serine/threonine-protein kinase 591 816 - -
Phac9g01979 903 Gene3D Transferase(Phosphotransferase) domain 1 591 818 - -
Phac9g01979 903 ProSiteProfiles Protein kinase domain profile. 515 801 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g01979 903 FunFam Probable LRR receptor-like serine/threonine-protein kinase At2g16250 289 419 - -
Phac9g01979 903 MobiDBLite consensus disorder prediction 472 491 - -
Phac9g01979 903 FunFam Leucine-rich repeat receptor protein kinase EMS1 187 285 - -
Phac9g01979 903 SUPERFAMILY L domain-like 91 398 - -
Phac9g01979 903 ProSiteProfiles Leucine-rich repeat profile. 219 241 IPR001611 GO:0005515
Phac9g01979 903 SMART LRR_typ_2 145 168 IPR003591 -
Phac9g01979 903 SMART LRR_typ_2 217 240 IPR003591 -
Phac9g01979 903 SMART LRR_typ_2 265 289 IPR003591 -
Phac9g01979 903 SMART LRR_typ_2 169 192 IPR003591 -
Phac9g01979 903 SMART LRR_typ_2 121 144 IPR003591 -
Phac9g01979 903 SMART LRR_typ_2 314 337 IPR003591 -
Phac9g01979 903 PRINTS Leucine-rich repeat signature 217 230 - -
Phac9g01979 903 PRINTS Leucine-rich repeat signature 172 185 - -
Phac9g01979 903 Pfam Leucine rich repeat 146 204 IPR001611 GO:0005515
Phac9g01979 903 FunFam Probable LRR receptor-like serine/threonine-protein kinase At2g16250 27 186 - -
Phac9g01979 903 FunFam Predicted protein 485 590 - -
Phac9g01979 903 SUPERFAMILY Protein kinase-like (PK-like) 488 796 IPR011009 -
Phac9g01979 903 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 194 393 - -
Phac9g01979 903 MobiDBLite consensus disorder prediction 857 874 - -
Phac9g01979 903 MobiDBLite consensus disorder prediction 835 903 - -
Phac9g01979 903 MobiDBLite consensus disorder prediction 876 903 - -
Phac9g01979 903 Pfam Protein tyrosine and serine/threonine kinase 521 795 IPR001245 GO:0004672|GO:0006468
Phac9g01979 903 Gene3D Ribonuclease Inhibitor 190 416 IPR032675 -
Phac9g01979 903 Gene3D Ribonuclease Inhibitor 27 189 IPR032675 -
Phac9g01979 903 Gene3D Phosphorylase Kinase; domain 1 494 589 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g01979 Phac-Chr9 18619177 18625268 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g01979 30 688 Miscellaneous Gene Families AT2G16250 56.456 0.0 723
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIV Phac9g01979 PK_Tyr_Ser-Thr 4.7e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g01979 - - gmx:100805769 1478.38