Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g01974 ATGGGGATAGTGTGGTTTGGGTTGTTGTTGTTGCTGGTGGTGAGTCAGGTGACACTGGAACAGATTGAGCCACTGAGTTCCTCTGAGGAGCGAGAATCGTTACTTGAACTGAGGGCTTCTCTGGGGTTGAGGAGCAAGGAATGGCCAAGAAAACCAGACCCTTGTTTACTCTGGGTTGGCATCACATGCCAGAATGGTCGAGTCGTTGGGATCAATATCTCTGGGTTTAAAAGAACCCGAATTGGTAGGAGGAACCCGCAATTTGCAGCGGATGCTTTGGCCAATTTCACTCTCTTGCAGTCCTTCAATGCCTCCAATTTCCTCCTTCCTGGCCCTATTCCTGATTGGTTTGGTCTCTCCCTTCCTTCTCTCAGAGTGCTTGATCTTCGTTCTTGCTCCATTGTTAATGCTATTCCCTTCACTCTTGGCAATTTGACCAACCTCACTAGTCTCTATCTCTCTGACAACAACCTCAATGGGAATATTCCCGAGTCTTTGGGTCAACTCTCTGCCCTTTCGGTTCTTGATCTTTCCAGGAATTCTCTTACTGGCTCCATACCAACGTCTTTTGCCTTTCTTGGGAATCTTTCCTCCCTTGACATGTCTGCCAATTTTTTGTTGGGGCCGATTCCCCCTGGCATAGGGTCTCTTTCCAGGTTACAGTACTTGAATCTTTCCAACAATGGACTTGCATCTTTGCCTGCTCAATTGGGGGGTCTAACCAGCTTAATTGTCCTTGATCTTAGTCAGAATTCTTTTGCCAGTGGCGGACTGCCTCTGGATTTGGTTGGGCTGAGGAACTTGCAGCAGATGATACTCACAAACAGCATGCTCACCGGAGTTCTGCCGGGGAGATTGTTTACTGGTTCATTGCAGTTGCAGTTCCTAGTACTGAGGCAGAACAATTTTAGTGGTTCTTTGCCTGTTGAGTTGTTGTCTCTGCCAAGATTGAGCTTCCTTGATGTGTCTGCAAATAATTTCAGCGGTCTGCTTCCTAATTCGAGTTTGGCTGCTAATGCTACTGTTGCGGTGCTCAATATTTCGCACAATAAGTTTTATGGAGGCCTCACTACTGCTCTAAGAAGGTTTGAGTTTGTTGATCTTTCAAACAATTATTTTGAGGGCAAGGTTCTGGATTTCATGCATAATGCGTCTCTAGATAGCAACTGTCTCCAGAACGCCACAAATCAGAGGTCAACGGTGGAATGTACATCATTTTATGCAGAGAGGGGGCTAAATTTTGATAATTTTGGACACCCGAATACAACAAACCCTCCTGCCTCCGAAAGCTCTGGAAAGAGCAATAAAACTAAGGTTATACTGGCAGCAGTCTTGGGTGGATTGGGTTTAATTGCACTCTTGGTGTTGCTAGTGGTTCTGTTGCTTCTGTGTGCTCGTAAGAGGGGTAATTCAAATCAGAGAGGAAACGGTGTCGGTCCTGCTCCTGTTGGCAGCAGTCCTCCAAACCCTGGTGTACCAATCCAATTTCCAAATGTAGGTGACTCATTTACATATCATCAGTTGCTCCAGGCAACTGGAGATTTCAATGATGTAAATCTTATCAAACATGGCCACACTGGGGACTTCTTCAATGGTGTTTTGGAGAGTGGGATTCCTGTCATCATCAAAAGAATCGACACGCGTTCAGCTAGAAAGGAGGCTTATCTGTCGGAGTTGGACTTCTTCAATAAGGTTTCTCATCAGAGATTTGTTCCATTTTTAGGTCATTGTTTAGAAAATGAGAATGAGAAGTTTCTGGTTTATAAAAATATGCCAAATGGGGACTTGTCTAATTGCTTGTACTACAAAAAGACTACATCTGAAGATGGTACTTTGCAATCACTGGACTGGATAACCAGGTTAAAAATTGCTACTGGAGCCGCAGAGGCCCTGTCGTATCTACATCATGAATGTATGCCACCCATTGTTCACAGGGATATTCAAGCAAGCAGTATACTTCTTGACGACAAATACGAAGTTCGGTTGGGTAGTCTAAGTGAAGCCTGTGCTCAAGAAGGTGAAATTCATCAAAGTAAGATCACCAGGTTTCTGCGGTTGCCTCAGTCCTCTGACCAAGGCCCATCTGGTAAGTAG 2094 0.4499 MGIVWFGLLLLLVVSQVTLEQIEPLSSSEERESLLELRASLGLRSKEWPRKPDPCLLWVGITCQNGRVVGINISGFKRTRIGRRNPQFAADALANFTLLQSFNASNFLLPGPIPDWFGLSLPSLRVLDLRSCSIVNAIPFTLGNLTNLTSLYLSDNNLNGNIPESLGQLSALSVLDLSRNSLTGSIPTSFAFLGNLSSLDMSANFLLGPIPPGIGSLSRLQYLNLSNNGLASLPAQLGGLTSLIVLDLSQNSFASGGLPLDLVGLRNLQQMILTNSMLTGVLPGRLFTGSLQLQFLVLRQNNFSGSLPVELLSLPRLSFLDVSANNFSGLLPNSSLAANATVAVLNISHNKFYGGLTTALRRFEFVDLSNNYFEGKVLDFMHNASLDSNCLQNATNQRSTVECTSFYAERGLNFDNFGHPNTTNPPASESSGKSNKTKVILAAVLGGLGLIALLVLLVVLLLLCARKRGNSNQRGNGVGPAPVGSSPPNPGVPIQFPNVGDSFTYHQLLQATGDFNDVNLIKHGHTGDFFNGVLESGIPVIIKRIDTRSARKEAYLSELDFFNKVSHQRFVPFLGHCLENENEKFLVYKNMPNGDLSNCLYYKKTTSEDGTLQSLDWITRLKIATGAAEALSYLHHECMPPIVHRDIQASSILLDDKYEVRLGSLSEACAQEGEIHQSKITRFLRLPQSSDQGPSGK* 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g01974 697 Pfam Leucine rich repeat 146 204 IPR001611 GO:0005515
Phac9g01974 697 Pfam Leucine Rich repeats (2 copies) 219 253 IPR025875 -
Phac9g01974 697 Gene3D Ribonuclease Inhibitor 27 190 IPR032675 -
Phac9g01974 697 MobiDBLite consensus disorder prediction 472 491 - -
Phac9g01974 697 Pfam Protein tyrosine and serine/threonine kinase 521 663 IPR001245 GO:0004672|GO:0006468
Phac9g01974 697 Gene3D Ribonuclease Inhibitor 191 414 IPR032675 -
Phac9g01974 697 Gene3D Phosphorylase Kinase; domain 1 494 589 - -
Phac9g01974 697 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 93 206 - -
Phac9g01974 697 ProSiteProfiles Leucine-rich repeat profile. 219 241 IPR001611 GO:0005515
Phac9g01974 697 SMART LRR_typ_2 145 168 IPR003591 -
Phac9g01974 697 SMART LRR_typ_2 217 240 IPR003591 -
Phac9g01974 697 SMART LRR_typ_2 265 289 IPR003591 -
Phac9g01974 697 SMART LRR_typ_2 169 192 IPR003591 -
Phac9g01974 697 SMART LRR_typ_2 121 144 IPR003591 -
Phac9g01974 697 SMART LRR_typ_2 314 337 IPR003591 -
Phac9g01974 697 FunFam Probable LRR receptor-like serine/threonine-protein kinase At2g16250 27 186 - -
Phac9g01974 697 FunFam Leucine-rich repeat receptor protein kinase EMS1 187 285 - -
Phac9g01974 697 SMART tyrkin_6 515 691 IPR020635 GO:0004713|GO:0006468
Phac9g01974 697 FunFam Probable LRR receptor-like serine/threonine-protein kinase At2g16250 289 419 - -
Phac9g01974 697 ProSiteProfiles Protein kinase domain profile. 515 697 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g01974 697 Gene3D Transferase(Phosphotransferase) domain 1 591 687 - -
Phac9g01974 697 SUPERFAMILY L domain-like 91 398 - -
Phac9g01974 697 FunFam - 591 687 - -
Phac9g01974 697 SUPERFAMILY Protein kinase-like (PK-like) 488 663 IPR011009 -
Phac9g01974 697 PRINTS Leucine-rich repeat signature 172 185 - -
Phac9g01974 697 PRINTS Leucine-rich repeat signature 217 230 - -
Phac9g01974 697 FunFam Predicted protein 485 590 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g01974 Phac-Chr9 18619177 18625268 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g01974 30 688 Miscellaneous Gene Families AT2G16250 56.456 0.0 723
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIV Phac9g01974 PK_Tyr_Ser-Thr 3.6e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g01974 - - gmx:100805769 1130.16