Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g01965 ATGGCTTCCAATTCCAATTCCAATTCCAGTTCCAATTCCAATTCCAGTTCCAATTCCAATTCTAATTCCGATTCCGATTCCAATTCCAATTCCCCATCTCCACCCGATTCATCTTCCTCCCAATCTCCACCACCATCGCAGGGCAATTCATCTCCTCCACCACCGTCACAGAACAATTCACCGCCTCCTCCCTCGTCAAACGATGAGAAATCTCCGCCGCCGCCGCCGCCGCCGCCACCACCTCCTGATAACGAATCAAGTGGCAACCGGTCACCGCCGCCCCCACGTTCGGGGCGTGAGTTTTCTCCTCCTCCACCTTCAAAGAACCGGTCGTCTCTTCCCAAGTCAACGTCTTCGAGCTCATCAGAAGATAGTGGAAGCCATTCATTGAGCACACCAATTATAATAGTAATCGCAGCTGCAGCTGGGCTTTTTCTCCTTCTTCTTCTCATAGCCATCGTTGCGTGTTCAAAAAGAAAGAAGAGATCTCAGTCTTCCATTAATTACTACGGCAATAAACCACATGATGGGTTTTACAAAAATCAGTATGGGTACAAGAACAATAACGTTGAGCACGTTATGAATATTCCTCCACATCCAAATCCACATCCAGGAGCAGCTTGGTCAACACCCCAACATGTTAGTACTGTATCGAGCAATTCCAGTTTCTCTGGGCCACATGGTCCCATTTTGCCACCTCCACACCCCACAGTGGCCCTCGGATTCAACCAAAGCTCCTTCACTTACGCCGAGCTCTCGGCTGCCACTGATGGCTTTAGCCAGCGCAACCTGCTGGGCCAGGGTGGCTTCGGATACGTCCACAAAGGTGTTTTACCCAATGGCAAGGAAATTGCAGTGAAGAGCCTGAAATCCACTGGGTGCCAAGGGGACAGAGAATTCCAAGCTGAGGTTGAAATCATCAGCCGTGTCCATCATCGCCATCTGGTCTCACTTGTTGGTTATTGCATGTCAGAAACCCAAAAGCTCCTCGTTTATGAGTTTGTGCCTAACAATACCTTCGAATACCACCTTCATGGAAAGGATCGACCTGTGATGGATTGGGATACCAGGCTCAAAATTGCGATTGGATCGGCCAGAGGACTTGCTTATTTACATGAGGATTGTCACCCTCGTATTATTCACCGAGACATAAAGGGTGCAAACATTCTTCTTGAAAACAACTTTGAAGCCAAAGTGGCAGATTTTGGGTTGGCAAAGTTTAATCAAGACGCTAACACTCACGTTTCTACTCGTGTAATGGGAACATTTGGGTATTTGGCTCCAGAGTATGCATCAACCGGTAAGCTAACTGACAAATCTGATGTGTTCTCGTTCGGTGTTATGCTTTTGGAGCTCATAACAGGTCGACCCCCTGTGGACAACACTGGGGAAATGGAAGATAGTTTGGCCGACTGGGTACGTATATTTTTTAATTAA 1437 0.4774 MASNSNSNSSSNSNSSSNSNSNSDSDSNSNSPSPPDSSSSQSPPPSQGNSSPPPPSQNNSPPPPSSNDEKSPPPPPPPPPPPDNESSGNRSPPPPRSGREFSPPPPSKNRSSLPKSTSSSSSEDSGSHSLSTPIIIVIAAAAGLFLLLLLIAIVACSKRKKRSQSSINYYGNKPHDGFYKNQYGYKNNNVEHVMNIPPHPNPHPGAAWSTPQHVSTVSSNSSFSGPHGPILPPPHPTVALGFNQSSFTYAELSAATDGFSQRNLLGQGGFGYVHKGVLPNGKEIAVKSLKSTGCQGDREFQAEVEIISRVHHRHLVSLVGYCMSETQKLLVYEFVPNNTFEYHLHGKDRPVMDWDTRLKIAIGSARGLAYLHEDCHPRIIHRDIKGANILLENNFEAKVADFGLAKFNQDANTHVSTRVMGTFGYLAPEYASTGKLTDKSDVFSFGVMLLELITGRPPVDNTGEMEDSLADWVRIFFN* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g01965 478 ProSitePatterns Serine/Threonine protein kinases active-site signature. 379 391 IPR008271 GO:0004672|GO:0006468
Phac9g01965 478 MobiDBLite consensus disorder prediction 1 128 - -
Phac9g01965 478 SUPERFAMILY Formin homology 2 domain (FH2 domain) 72 216 - -
Phac9g01965 478 Gene3D Transferase(Phosphotransferase) domain 1 335 478 - -
Phac9g01965 478 FunFam proline-rich receptor-like protein kinase PERK1 237 334 - -
Phac9g01965 478 MobiDBLite consensus disorder prediction 1 36 - -
Phac9g01965 478 ProSitePatterns Protein kinases ATP-binding region signature. 265 287 IPR017441 GO:0005524
Phac9g01965 478 MobiDBLite consensus disorder prediction 37 89 - -
Phac9g01965 478 CDD STKc_IRAK 265 474 - -
Phac9g01965 478 SUPERFAMILY Protein kinase-like (PK-like) 239 466 IPR011009 -
Phac9g01965 478 ProSiteProfiles Protein kinase domain profile. 259 478 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g01965 478 MobiDBLite consensus disorder prediction 111 128 - -
Phac9g01965 478 Pfam Protein tyrosine and serine/threonine kinase 262 462 IPR001245 GO:0004672|GO:0006468
Phac9g01965 478 Gene3D Phosphorylase Kinase; domain 1 236 334 - -
Phac9g01965 478 MobiDBLite consensus disorder prediction 96 110 - -
Phac9g01965 478 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 141 474 IPR047117 -
Phac9g01965 478 FunFam proline-rich receptor-like protein kinase PERK8 335 478 - -
Phac9g01965 478 SMART serkin_6 259 473 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g01965 Phac-Chr9 18536403 18540154 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g01965 63 474 Trihelix Transcription Factor Family AT1G70460 47.897 3.46e-122 371
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Phac9g01965 PK_Tyr_Ser-Thr 2.3e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g01965 - - gmx:100806299 568.155