Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g01964 ATGGCTTCCAATTCCAATTCCAATTCCAGTTCCAATTCCAATTCCAGTTCCAATTCCAATTCTAATTCCGATTCCGATTCCAATTCCAATTCCCCATCTCCACCCGATTCATCTTCCTCCCAATCTCCACCACCATCGCAGGGCAATTCATCTCCTCCACCACCGTCACAGAACAATTCACCGCCTCCTCCCTCGTCAAACGATGAGAAATCTCCGCCGCCGCCGCCGCCGCCGCCACCACCTCCTGATAACGAATCAAGTGGCAACCGGTCACCGCCGCCCCCACGTTCGGGGCGTGAGTTTTCTCCTCCTCCACCTTCAAAGAACCGGTCGTCTCTTCCCAAGTCAACGTCTTCGAGCTCATCAGAAGATAGTGGAAGCCATTCATTGAGCACACCAATTATAATAGTAATCGCAGCTGCAGCTGGGCTTTTTCTCCTTCTTCTTCTCATAGCCATCGTTGCGTGTTCAAAAAGAAAGAAGAGATCTCAGTCTTCCATTAATTACTACGGCAATAAACCACATGATGGGTTTTACAAAAATCAGTATGGGTACAAGAACAATAACGTTGAGCACGTTATGAATATTCCTCCACATCCAAATCCACATCCAGGAGCAGCTTGGTCAACACCCCAACATGTTAGTACTGTATCGAGCAATTCCAGTTTCTCTGGGCCACATGGTCCCATTTTGCCACCTCCACACCCCACAGTGGCCCTCGGATTCAACCAAAGCTCCTTCACTTACGCCGAGCTCTCGGCTGCCACTGATGGCTTTAGCCAGCGCAACCTGCTGGGCCAGGGTGGCTTCGGATACGTCCACAAAGGTGTTTTACCCAATGGCAAGGAAATTGCAGTGAAGAGCCTGAAATCCACTGGGTGCCAAGGGGACAGAGAATTCCAAGCTGAGGTTGAAATCATCAGCCGTGTCCATCATCGCCATCTGGTCTCACTTGTTGGTTATTGCATGTCAGAAACCCAAAAGCTCCTCGTTTATGAGTTTGTGCCTAACAATACCTTCGAATACCACCTTCATGGAAAGGATCGACCTGTGATGGATTGGGATACCAGGCTCAAAATTGCGATTGGATCGGCCAGAGGACTTGCTTATTTACATGAGGATTGTCACCCTCGTATTATTCACCGAGACATAAAGGGTGCAAACATTCTTCTTGAAAACAACTTTGAAGCCAAAGTGGCAGATTTTGGGTTGGCAAAGTTTAATCAAGACGCTAACACTCACGTTTCTACTCGTGTAATGGGAACATTTGGGTATTTGGCTCCAGAGTATGCATCAACCGGTAAGCTAACTGACAAATCTGATGTGTTCTCGTTCGGTGTTATGCTTTTGGAGCTCATAACAGGTCGACCCCCTGTGGACAACACTGGGGAAATGGAAGATAGTTTGGCCGACTGGGCTAGACCACTTTGTACAAAGGCAATGGAGGATGGAAGTTTTGAAGGGCTTGTGGATCCACGTTTAGAGGGGAATTATGACAAGCAGCAAATGGCTTGTATGGTGGCTTGTGCTGCATTTAGCATAAGGCACTCAGCAAAGAGGCGTCCAAAAATGAGTCAGGTTGTGAGAGTACTGGAAGGTGATGTGTCAGTAGACGTGCTTAGTCAGGAGGGAGTGAAACCTGGACAAAGTAGAATGTTCAGCTCAAGTGGGGAGTGTGGTGCGAAGACATACGGTGCTGACATGGTGAAGTTCAGGAAACTAGATAGTAGCAGTGAGTTTGGTGCAACCAGTGAATACGGCCTTAAACCTCCCATCCCAAGAAGTGACCAATCATCTGCTGAATATGCCAATGCCAGGAGGGTAGGAGCTCGAACACACACTCCTTAA 1848 0.4811 MASNSNSNSSSNSNSSSNSNSNSDSDSNSNSPSPPDSSSSQSPPPSQGNSSPPPPSQNNSPPPPSSNDEKSPPPPPPPPPPPDNESSGNRSPPPPRSGREFSPPPPSKNRSSLPKSTSSSSSEDSGSHSLSTPIIIVIAAAAGLFLLLLLIAIVACSKRKKRSQSSINYYGNKPHDGFYKNQYGYKNNNVEHVMNIPPHPNPHPGAAWSTPQHVSTVSSNSSFSGPHGPILPPPHPTVALGFNQSSFTYAELSAATDGFSQRNLLGQGGFGYVHKGVLPNGKEIAVKSLKSTGCQGDREFQAEVEIISRVHHRHLVSLVGYCMSETQKLLVYEFVPNNTFEYHLHGKDRPVMDWDTRLKIAIGSARGLAYLHEDCHPRIIHRDIKGANILLENNFEAKVADFGLAKFNQDANTHVSTRVMGTFGYLAPEYASTGKLTDKSDVFSFGVMLLELITGRPPVDNTGEMEDSLADWARPLCTKAMEDGSFEGLVDPRLEGNYDKQQMACMVACAAFSIRHSAKRRPKMSQVVRVLEGDVSVDVLSQEGVKPGQSRMFSSSGECGAKTYGADMVKFRKLDSSSEFGATSEYGLKPPIPRSDQSSAEYANARRVGARTHTP* 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g01964 615 ProSitePatterns Serine/Threonine protein kinases active-site signature. 379 391 IPR008271 GO:0004672|GO:0006468
Phac9g01964 615 MobiDBLite consensus disorder prediction 1 128 - -
Phac9g01964 615 Gene3D Transferase(Phosphotransferase) domain 1 335 543 - -
Phac9g01964 615 FunFam proline-rich receptor-like protein kinase PERK1 237 334 - -
Phac9g01964 615 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 141 574 IPR047117 -
Phac9g01964 615 SUPERFAMILY Formin homology 2 domain (FH2 domain) 72 216 - -
Phac9g01964 615 FunFam Proline-rich receptor-like protein kinase PERK1 335 542 - -
Phac9g01964 615 Gene3D Phosphorylase Kinase; domain 1 236 334 - -
Phac9g01964 615 MobiDBLite consensus disorder prediction 1 36 - -
Phac9g01964 615 MobiDBLite consensus disorder prediction 580 615 - -
Phac9g01964 615 ProSitePatterns Protein kinases ATP-binding region signature. 265 287 IPR017441 GO:0005524
Phac9g01964 615 MobiDBLite consensus disorder prediction 37 89 - -
Phac9g01964 615 ProSiteProfiles Protein kinase domain profile. 259 537 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g01964 615 SUPERFAMILY Protein kinase-like (PK-like) 239 531 IPR011009 -
Phac9g01964 615 MobiDBLite consensus disorder prediction 111 128 - -
Phac9g01964 615 Pfam Protein tyrosine and serine/threonine kinase 262 463 IPR001245 GO:0004672|GO:0006468
Phac9g01964 615 SMART serkin_6 259 494 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g01964 615 MobiDBLite consensus disorder prediction 96 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g01964 Phac-Chr9 18536403 18540154 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g01964 63 602 Trihelix Transcription Factor Family AT1G70460 46.435 3.34e-147 441
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Phac9g01964 PK_Tyr_Ser-Thr 1.6e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g01964 - - gmx:100806299 770