Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g01951 ATGGAGGATGGTGAGAAACCCACGGGTAATTCCCATGGCATTTCTGATATGGATGTTGTTGATGCGGCTTTGCATGTCCAGCATGTGGTGTCTTCCCCTACTAACAATTCCCCTGCTCAGCAACAGCAGGATCAAGTAATGGTCGAACAGGGTGATGATAACAAAAACGGGGATTCTGATCCTAGTAATGTGCCAGAGACCAGTGTTATTAGCGAGAATCAGTTTGAGCTAGAAGATTCCAAGACCGTTTCGCACCATGAACTGATCACTCCTAAGCCTAAAGAAAAGAACATTAGAGAAATGAAGAATGTGCTAAATGATACCGAGATGACTGAGTATGATGAGTATGGCACACCTCTGGACCGAGAAACATTTATGAAAGAGATTGAGAATTTCTACAGAGAGCGGTCCTTGGAATTTAAGCCTCCTAAGTTTTATGGAGAGCCACTAAATTGCCTTAAGTTGTGGAGAGCTGTTATCAGACTAGGTGGCTATGATGTGGTAACTGGCTCCAAGTTGTGGCGACAAGTAGGAGAGTCTTTCAACCCCCCAAAGACATGTACTACAGTCTCATGGACATTTAGAATCTTTTATGAGAAGGCACTTTTAGAGTATGAAAAGCACAAGAGAGAGACTGGGGAGCTACAGCTCCCTGTTGGATCATTCCATCAATCTTCAAATGTGGAAAAAGAGACTACTGTTTACCAGGCTCCAGGATCAGGTAGAGCACGAAGGGATGCTGCAGCCCGTGCAATGCAAGGTTGGCATACTCAGCGCCTTCTTGGATATGGTGAGGTTGCTGAGCCAGCTACTAAGGACAAGAACTTCAGTTCCACTCCAAAGCGTGAAAAGAATCTAAAAAGCATTGGTATGATTAATAAACAGAGGACGCAGGCTGGTTTGGACCATGCTGAGAAAGCTGCAAATATTGAAGGAGATAGACAATTGATCACAGCAGTGGTGGACATTGGACCCCCAGCTGACTGGGTGAAGATCAATGTACGGGAAACTAAAGATTGTTTCGAGGTGTATGCCCTAGTTCCCGGGCTCCTTCGTGAGGAGGTGCGAGTCCAATCAGATCCAGTTGGACGTCTGGTTATAACTGGTCTGCCAGAACACATTGATAATCCATGGGGAATTACCCCCTTCAAAAAGGTAGTGAACTTACCTGCAAGAATTGATCCGCTTCAGACATCCGCTGTCGTTAGTTTGCATGGTCGACTATTTGTACGGGTTCCTTTTGAGCAGGGAGCTGTATGA 1260 0.454 MEDGEKPTGNSHGISDMDVVDAALHVQHVVSSPTNNSPAQQQQDQVMVEQGDDNKNGDSDPSNVPETSVISENQFELEDSKTVSHHELITPKPKEKNIREMKNVLNDTEMTEYDEYGTPLDRETFMKEIENFYRERSLEFKPPKFYGEPLNCLKLWRAVIRLGGYDVVTGSKLWRQVGESFNPPKTCTTVSWTFRIFYEKALLEYEKHKRETGELQLPVGSFHQSSNVEKETTVYQAPGSGRARRDAAARAMQGWHTQRLLGYGEVAEPATKDKNFSSTPKREKNLKSIGMINKQRTQAGLDHAEKAANIEGDRQLITAVVDIGPPADWVKINVRETKDCFEVYALVPGLLREEVRVQSDPVGRLVITGLPEHIDNPWGITPFKKVVNLPARIDPLQTSAVVSLHGRLFVRVPFEQGAV* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g01951 419 FunFam AT-rich interactive domain-containing protein 3 310 418 - -
Phac9g01951 419 CDD ARID 121 206 - -
Phac9g01951 419 FunFam AT-rich interactive domain-containing protein 3 119 218 - -
Phac9g01951 419 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN ARID DOMAIN- CONTAINING PROTEIN DEAD RINGER PROTEIN B-CELL REGULATOR OF IGH TRANSCRIPTION BRIGHT 26 416 IPR045147 GO:0006357
Phac9g01951 419 MobiDBLite consensus disorder prediction 1 96 - -
Phac9g01951 419 Gene3D - 120 218 IPR036431 GO:0003677
Phac9g01951 419 SUPERFAMILY HSP20-like chaperones 327 414 IPR008978 -
Phac9g01951 419 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 318 419 IPR002068 -
Phac9g01951 419 Pfam ARID/BRIGHT DNA binding domain 122 206 IPR001606 GO:0003677
Phac9g01951 419 SMART ARID_2 116 206 - -
Phac9g01951 419 ProSiteProfiles ARID domain profile. 119 210 IPR001606 GO:0003677
Phac9g01951 419 SMART bright_3 120 211 IPR001606 GO:0003677
Phac9g01951 419 MobiDBLite consensus disorder prediction 78 96 - -
Phac9g01951 419 MobiDBLite consensus disorder prediction 28 50 - -
Phac9g01951 419 SUPERFAMILY ARID-like 107 217 IPR036431 GO:0003677
Phac9g01951 419 MobiDBLite consensus disorder prediction 57 77 - -
Phac9g01951 419 CDD ACD_sHsps_p23-like 334 413 - -
Phac9g01951 419 Gene3D - 318 418 IPR008978 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g01951 Phac-Chr9 18350553 18358431 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g01951 28 416 ARID Transcription Factor Family AT1G76510 62.564 5.26e-161 459
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Phac9g01951 ARID 1.9e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g01951 - - gmx:100777965 728.783