Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g01938 ATGCTGGCAATGGAAGACCTACTGTGTGAACTTAGTGATCATGAAAAGAGAAACGAGCAAGGTCTGCCACCGGGTTTCAGGTTTCACCCCACTGATGAAGAACTTATAACCTTTTACTTGGCTTCAAAAGTCTTCAATGGGAGCTTCACTAGTGTCAAGTTTGCTGAGGTTGATCTCAATAGATGTGAGCCGTGGGAACTTCCAGATGTGGCAAAGATGGGGGAGAGAGAGTGGTATCTGTTCAGCTTGAGAGACAGAAAATATCCAACTGGGCTTAGAACAAACAGGGCCACCGGAGCTGGGTACTGGAAAGCCACTGGGAAGGACAAGGAAGTGTTCAGTGCATCAAGTGGAACCCTACTTGGGATGAAGAAGACCCTTGTTTTCTACAAAGGAAGGGCCCCTCGTGGTGAAAAGACCAAATGGGTCATGCACGAGTACCGTTTGGACGGTGACTTTTCCCTTCCCCACCCTCACCCTCATCACATTTCTAAGGAGGAGTGGGTGATATGCAGGATATTTCATAAATCCGGGGAAAAGAGGACTCCACTGCTCCAAGTCCAAGGACATTCAGATGCTTCTTCGTCTCCAACAAAAAATTCTTTACCTCCTTTACTTGCAAGCCCAACTTCCTTTACATTGGAACTAGAATGTCAATCCCAACAAAGCCCGGTTCTCATTCACCACCACCAAGACCAAAACCACATCTCTCACTCTCACCCTTACCTTTTCCCATTGCATGCATCACCACAACTCACTAACGCCAGAAACCATCCTTCATTTTCTGACCTGTTCTTTAAGCCCCTGCACAACTCACAACAAAACTGCATCTTCAAGGCCAAGGAAAAAACAGTTCCAAAAGTAGTCAAAACGGAGGAGGCTACAGCATTCTATCAGTACCATTTACTAGGTGACGCCAATAACTTGCGGGTGAACCAAAATCCGAGCAATTTCCCAAACCCTTTCCCTGATGTTGAGGTGGATGCTGGGCTGATGGCATTCTCAGGAGGTCCAAATGCTGAAGTTAGGGACATGTCCACTTCAACTGCCTTTAATAGGGTAGGGTTGCAGCAGGTGATAGATGCTGCTCATATCGGAATAGATTCTTGGCCTCTGGCCCAGCATGTTTAA 1131 0.4677 MLAMEDLLCELSDHEKRNEQGLPPGFRFHPTDEELITFYLASKVFNGSFTSVKFAEVDLNRCEPWELPDVAKMGEREWYLFSLRDRKYPTGLRTNRATGAGYWKATGKDKEVFSASSGTLLGMKKTLVFYKGRAPRGEKTKWVMHEYRLDGDFSLPHPHPHHISKEEWVICRIFHKSGEKRTPLLQVQGHSDASSSPTKNSLPPLLASPTSFTLELECQSQQSPVLIHHHQDQNHISHSHPYLFPLHASPQLTNARNHPSFSDLFFKPLHNSQQNCIFKAKEKTVPKVVKTEEATAFYQYHLLGDANNLRVNQNPSNFPNPFPDVEVDAGLMAFSGGPNAEVRDMSTSTAFNRVGLQQVIDAAHIGIDSWPLAQHV* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g01938 376 Gene3D NAC domain 31 180 IPR036093 GO:0003677|GO:0006355
Phac9g01938 376 SUPERFAMILY NAC domain 17 176 IPR036093 GO:0003677|GO:0006355
Phac9g01938 376 ProSiteProfiles NAC domain profile. 22 176 IPR003441 GO:0003677|GO:0006355
Phac9g01938 376 FunFam NAC domain-containing protein 100-like 31 180 - -
Phac9g01938 376 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 19 246 - -
Phac9g01938 376 Pfam No apical meristem (NAM) protein 23 149 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g01938 Phac-Chr9 18298327 18301093 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g01938 1 182 NAC Transcription Factor Family AT1G76420 74.176 4.00e-97 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phac9g01938 NAM 7.9e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g01938 - - gmx:100780313 548.895