Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g01915 ATGAATTTGTTTCGGGTAGTTTATTGGGTAGTGTGGTGTTTGGGATCTGTTGGGGCTGCAAACGTGTCATCCTCGAGACCCTCCGTCGTCAACATTGGGGCAATCTTCAACATCGATTCCGTCCTTGGGAAAGTGGCTAAACTTACATTGGAGGAAGCCGTGAAAGATGTTAACGCCGACACTAACATTCTACATGGAACTGAAATTGTTCTCACTATGCAAAATTCCAATTACAGCGGTTTCTTAGGCATGGTTCAAGCTTTGCGGTTCATGGAGACTGATGTGGTTGCAATAATAGGACCACAATCTTCTGTGGTTGCCCATATAATATCCCATGTTGCTAATGAACTACGGGTTCCTTTATTGTCATTTGCGGCAACAGACCCTACCCTCACATCGCTGCAGTTTCCTTTCTTTGTGAGGACAACACAGAGTGATTTGTACCAAATGAAGGCTGTAGCTGAAATCATTGATTACTATGGTTGGAAGGAGGTGATTGCCATATATGTGGATGATGATTATGGACGGAATGGTGTGGCTGCTTTGGACGATGAACTAGCTGCCAGGCGCTGTAGAATCTCCTTCAAGGAAGGAATTAATTCCGGAACTGAAGTCAACCGGGGAGAAATTACTAGTTTGCTTGTGAAAGTGGCACTGATGCAGTCTCGGGTCATTGTTCTACATGCTCAAACTGATTATGGTTTTATGGTTTTCAATGTGGCACGTTACCTTGGGATGACAGACAATGGTTATGTGTGGATAGTCACAGACTGGCTCTCTTCACTTTTGGATTCTGCCTCTCTCCCTTCAGAGACAATGGATGTTCTCCAGGGAGTACTCGTTCTGCGCCAGCACACACCTGATTCAGATAGAAAAAGTGCATTTTCCTCTAGGTGGAACAAGTTGACTGGTGGCTCTTTGGGGTTACATTCTTATGGCCTCTATGCTTATGATTCTGTTTGGCTTGTTGCACGGGCCATTGATGCTTTTTTCAGTCAGGGTGGGGTTGTTTCGTGTACTAATTACACAAGTTTAGGTGGTGAGAATAAGGGAGGTGATCTGAACCTTGATGCAATGAGCATTTTTGACAACGGAACGCTTCTGCTGGAGAACATATTGCAGAGTGATTTTGTTGGACTATCAGGTCGAATGAAATTTGAACCAGATCGATCTCTCGTTCATCCTGCCTATGACGTCCTTAATGTGGTTGGAACTGGGCTTAGGAGGGTTGGTTACTGGTCCAACTATTCTGGTTTGTCAATTGTATCTCCTGAGATACTGTATGCTAAGCTACCTAATAGATCTAGTGCGAATCAGAAGCTTTACAGTGTGATATGGCCTGGAGAAACATTATCTAAACCCCGTGGATGGGTCTTCCCAAATAATGGTAGACAGTTGAGAATTGGTGTGCCTATCCGAGTCAGTTTCCGTGAATTTCTCTCACCAGTGAAGGGAACTCAGATGTTCAATGGTTTTTGTGTCGATGTATTCACAGCAGCTCTGAACTTGTTGCCTTATGCTGTTCCTTACCGCTTTGTTCCATTTGGTGATGGACACAAAAATCCAAGCTACACAGAACTTGTCCACTTAATCACAACTGGTTACTTTGATGGTGCCATCGGTGATATTGCTATTGTCACAAATCGGACAAGGATTGTAGATTTTACGCAACCATATGCATCATCGGGACTTGTTGTGGTGGCCCCATTCACAAAAATTAATTCTGGTGGTTGGGCTTTCCTGCAGCCATTTACTCCTCTTATGTGGATTGTGACTGCTACTTTCTTTCTTCTCATTGGGATAGTTATATGGATTCTGGAACACAGGATAAATGATGAGTTCAGGGGTCCACCCAGACAGCAAATTATAACCTTGTTATGGAGAGAATACCATGAGTTCTCTTGGTCGGTTTGTGATGCTCATATGGCTATTTGTGGTTTTGATCCTCACTTCCAGCTACACTGCAAGTTTAACATCCATACTCACAGTGCAACAGTTATCTTCTCGTATCAGTGGAATAGATAG 2025 0.436 MNLFRVVYWVVWCLGSVGAANVSSSRPSVVNIGAIFNIDSVLGKVAKLTLEEAVKDVNADTNILHGTEIVLTMQNSNYSGFLGMVQALRFMETDVVAIIGPQSSVVAHIISHVANELRVPLLSFAATDPTLTSLQFPFFVRTTQSDLYQMKAVAEIIDYYGWKEVIAIYVDDDYGRNGVAALDDELAARRCRISFKEGINSGTEVNRGEITSLLVKVALMQSRVIVLHAQTDYGFMVFNVARYLGMTDNGYVWIVTDWLSSLLDSASLPSETMDVLQGVLVLRQHTPDSDRKSAFSSRWNKLTGGSLGLHSYGLYAYDSVWLVARAIDAFFSQGGVVSCTNYTSLGGENKGGDLNLDAMSIFDNGTLLLENILQSDFVGLSGRMKFEPDRSLVHPAYDVLNVVGTGLRRVGYWSNYSGLSIVSPEILYAKLPNRSSANQKLYSVIWPGETLSKPRGWVFPNNGRQLRIGVPIRVSFREFLSPVKGTQMFNGFCVDVFTAALNLLPYAVPYRFVPFGDGHKNPSYTELVHLITTGYFDGAIGDIAIVTNRTRIVDFTQPYASSGLVVVAPFTKINSGGWAFLQPFTPLMWIVTATFFLLIGIVIWILEHRINDEFRGPPRQQIITLLWREYHEFSWSVCDAHMAICGFDPHFQLHCKFNIHTHSATVIFSYQWNR* 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g01915 674 FunFam Glutamate receptor 461 576 - -
Phac9g01915 674 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 30 636 IPR015683 -
Phac9g01915 674 FunFam Glutamate receptor 145 299 - -
Phac9g01915 674 Gene3D - 461 576 - -
Phac9g01915 674 SUPERFAMILY Periplasmic binding protein-like II 442 594 - -
Phac9g01915 674 Pfam Receptor family ligand binding region 50 404 IPR001828 -
Phac9g01915 674 SUPERFAMILY Periplasmic binding protein-like I 24 458 IPR028082 -
Phac9g01915 674 CDD PBP1_GABAb_receptor_plant 31 422 IPR044440 -
Phac9g01915 674 Gene3D - 49 394 - -
Phac9g01915 674 SMART GluR_14 467 630 IPR001320 GO:0015276|GO:0016020
Phac9g01915 674 Gene3D - 145 419 - -
Phac9g01915 674 Gene3D - 577 658 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g01915 Phac-Chr9 18215993 18221179 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g01915 24 627 Ion Channels AT1G42540 63.531 0.0 848
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g01915 K05387 - gmx:102661260 1124