Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g01893 ATGATGAGAGATGGTGATGTGACATCATCATCTGCTACCATGATGGAAGCTTCACCACCTGATGGAACAACAACTTCAATGGATTTTGACTACATGGGTGAGCTTTTCTACGATGGGTGCTGGTTGGAAGCCTCTGTTGATGGATCTGACTTCTTGCTGCAAAGTCCTTCCTATTCCAATCCCCTCTTTGACCCTTCATTCTCCTGGCCTGCCTTGGAGACCAACCACAATGAATCCCAGGGTACTGCTTTTGGGACACAAGAAGAAGGCCACAACAACAATGTTGTGGCTGCTCGTGGAGGTGGCGGTGGTGGTCAACAGTTTCAGCCTGAAACTATTTCAATTGAAGGAGCATCTGATGGGGTCAGAAGATGGAGGTTTGCACCCACACCTAGTCCAGCGCCTGGACCTTCCATAATGGAGAAGCTGGTAAGGGCCCTCATGAGGATCAAAGACTACAATAGGAACAAAAATATGCTTATACAGATATGGGTGCCGGTTCATAGAGGGGGTAGGCCGATTCTCGCAGCTAATGATATTCTGTTCTCACTCGATTCAAGGTCTATGAACCTTGCAAAGTACCGCGAAATCTCTGTGAGGTATGAGTTTTCTGCTGAGGAGGGTGAGGTCAAGGAGTTGGTGCCAGTAGAGGAGGGTGACTCCAAGGAATTGGTGCTAGGATTGCCCGGTAGAGTGTTTAGGGACAAGGTTCCTGAGTGGACTCCTGATGTTAGATTCTTTAGGAGTGACGAGTACCCGCGACTCGACCATGCTCAAGAGTATGATGTGAGTGGGTCACTAGCGGTTCCAATCTTTGAGCAAGGGAGCAAGATGTGCTTGGGAGTTATTGAGGTCGTGATGACTACTCAGCAGATCAACTATGGTCCTGAACTTGAGAGTGTTTGCAAAGCACTTGAGGCTGTTGATCTTAGAAGCTCAAAACAATTAAGTATTCAGAATGTGAAGGCATGCAACAGGTCCTACGAAGCTGTACTACCTGAGATTCAACAGGTGTTGAGATCTGCATGTGAAATGCATAAATTACCTTTAGCTCAAACTTGGATCCCATGTGTCCAACAAGGCAAAGAGGGGTGCCGGCACTCTGAAGATAATTATCTATTTTGTATATCTCCTGCAGAGCATGCTTGCTATGTTGGTGATCCCAAAATCAGGTCTTTTCACGAGTCTTGCACCGAGCATCACTTGTTGAAGGGTGAAGGTGTTGCTGGCGGAGCTTTTATGACCAACCAACCATGTTTCTCAGATGACATAACTTCCTTAAGCAAGAAAGACTATCCACTGTCTCATCATGCGAGGTTGTTTGGATTGCGTGCTGCTGTTGCCATACGCCTCCGAAGCATCTACAACAGCACAGATGACTTTGTTTTAGAGTTCTTCTTGCCGGTAGATTGCAATGACAGTGAAGAGCAGAGAAACATGCTTACATCATTGTCCATCATCATACAAAGGGTTTGTCGCAGCTTGCGGGTTATAAGTGATAAAGAATTGGTGGAAGCTAAGTTGTCAATTGATGAAGGGATATCCCTAGCAGATAGTGGATTTGATAGGACTGCAATTTGTGAGGAACTTCAACACAAAGGGACGGTTGCCTCGTTCGATACTGAAGAAAAATTAAGTGAAACAACTGGTAGAAAGTTCTCTGACCCAATGCAGCAACAAGAAAGTCCTATTTTAAAAGGAAACCTTGACTGTGTCAGGGAGAGTTCTACTTCTGTTGAGGGTAACTTATCAAGTGTGGGAATGAGTAAAATGGGAGACAGAAGACGGGCCAAAGCAGAGAAAACTATCACTTTGCAAGTTCTAAGACAATATTTTGCTGGAAGCCTAAAAGACGCTGCAAAGAATATCGGTGTGTGTACTACAACCTTGAAAAGGATCTGCCGGCAACATGGGATAAAGCGTTGGCCATCCCGAAAGATAAAAAAGGAACCAAACTGTTCTCAACTTTCAATCAAACTGATAATCCAAACTCAATAA 1998 0.4499 MMRDGDVTSSSATMMEASPPDGTTTSMDFDYMGELFYDGCWLEASVDGSDFLLQSPSYSNPLFDPSFSWPALETNHNESQGTAFGTQEEGHNNNVVAARGGGGGGQQFQPETISIEGASDGVRRWRFAPTPSPAPGPSIMEKLVRALMRIKDYNRNKNMLIQIWVPVHRGGRPILAANDILFSLDSRSMNLAKYREISVRYEFSAEEGEVKELVPVEEGDSKELVLGLPGRVFRDKVPEWTPDVRFFRSDEYPRLDHAQEYDVSGSLAVPIFEQGSKMCLGVIEVVMTTQQINYGPELESVCKALEAVDLRSSKQLSIQNVKACNRSYEAVLPEIQQVLRSACEMHKLPLAQTWIPCVQQGKEGCRHSEDNYLFCISPAEHACYVGDPKIRSFHESCTEHHLLKGEGVAGGAFMTNQPCFSDDITSLSKKDYPLSHHARLFGLRAAVAIRLRSIYNSTDDFVLEFFLPVDCNDSEEQRNMLTSLSIIIQRVCRSLRVISDKELVEAKLSIDEGISLADSGFDRTAICEELQHKGTVASFDTEEKLSETTGRKFSDPMQQQESPILKGNLDCVRESSTSVEGNLSSVGMSKMGDRRRAKAEKTITLQVLRQYFAGSLKDAAKNIGVCTTTLKRICRQHGIKRWPSRKIKKEPNCSQLSIKLIIQTQ* 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g01893 665 PANTHER PROTEIN NLP8 114 652 IPR045012 GO:0003700
Phac9g01893 665 MobiDBLite consensus disorder prediction 1 23 - -
Phac9g01893 665 ProSiteProfiles RWP-RK domain profile. 589 665 IPR003035 -
Phac9g01893 665 Pfam RWP-RK domain 602 649 IPR003035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g01893 Phac-Chr9 17910534 17916032 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g01893 15 649 NLP Transcription Factor Family AT1G20640 49.307 0.0 585
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Phac9g01893 RWP-RK 1.7e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g01893 - - gmx:100785135 1081.63