Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g01892 ATGATGAGAGATGGTGATGTGACATCATCATCTGCTACCATGATGGAAGCTTCACCACCTGATGGAACAACAACTTCAATGGATTTTGACTACATGGGTGAGCTTTTCTACGATGGGTGCTGGTTGGAAGCCTCTGTTGATGGATCTGACTTCTTGCTGCAAAGTCCTTCCTATTCCAATCCCCTCTTTGACCCTTCATTCTCCTGGCCTGCCTTGGAGACCAACCACAATGAATCCCAGGGTACTGCTTTTGGGACACAAGAAGAAGGCCACAACAACAATGTTGTGGCTGCTCGTGGAGGTGGCGGTGGTGGTCAACAGTTTCAGCCTGAAACTATTTCAATTGAAGGAGCATCTGATGGGGTCAGAAGATGGAGGTTTGCACCCACACCTAGTCCAGCGCCTGGACCTTCCATAATGGAGAAGCTGGTAAGGGCCCTCATGAGGATCAAAGACTACAATAGGAACAAAAATATGCTTATACAGATATGGGTGCCGGTTCATAGAGGGGGTAGGCCGATTCTCGCAGCTAATGATATTCTGTTCTCACTCGATTCAAGGTCTATGAACCTTGCAAAGTACCGCGAAATCTCTGTGAGGTATGAGTTTTCTGCTGAGGAGGGTGAGGTCAAGGAGTTGGTGCCAGTAGAGGAGGGTGACTCCAAGGAATTGGTGCTAGGATTGCCCGGTAGAGTGTTTAGGGACAAGGTTCCTGAGTGGACTCCTGATGTTAGATTCTTTAGGAGTGACGAGTACCCGCGACTCGACCATGCTCAAGAGTATGATGTGAGTGGGTCACTAGCGGTTCCAATCTTTGAGCAAGGGAGCAAGATGTGCTTGGGAGTTATTGAGGTCGTGATGACTACTCAGCAGATCAACTATGGTCCTGAACTTGAGAGTGTTTGCAAAGCACTTGAGGCTGTTGATCTTAGAAGCTCAAAACAATTAAGTATTCAGAATGTGAAGGCATGCAACAGGTCCTACGAAGCTGTACTACCTGAGATTCAACAGGTGTTGAGATCTGCATGTGAAATGCATAAATTACCTTTAGCTCAAACTTGGATCCCATGTGTCCAACAAGGCAAAGAGGGGTGCCGGCACTCTGAAGATAATTATCTATTTTGTATATCTCCTGCAGAGCATGCTTGCTATGTTGGTGATCCCAAAATCAGGTCTTTTCACGAGTCTTGCACCGAGCATCACTTGTTGAAGGGTGAAGGTGTTGCTGGCGGAGCTTTTATGACCAACCAACCATGTTTCTCAGATGACATAACTTCCTTAAGCAAGAAAGACTATCCACTGTCTCATCATGCGAGGTTGTTTGGATTGCGTGCTGCTGTTGCCATACGCCTCCGAAGCATCTACAACAGCACAGATGACTTTGTTTTAGAGTTCTTCTTGCCGGTAGATTGCAATGACAGTGAAGAGCAGAGAAACATGCTTACATCATTGTCCATCATCATACAAAGGGTTTGTCGCAGCTTGCGGGTTATAAGTGATAAAGAATTGGTGGAAGCTAAGTTGTCAATTGATGAAGGGATATCCCTAGCAGATAGTGGATTTGATAGGACTGCAATTTGTGAGGAACTTCAACACAAAGGGACGGTTGCCTCGTTCGATACTGAAGAAAAATTAAGTGAAACAACTGGTAGAAAGTTCTCTGACCCAATGCAGCAACAAGAAAGTCCTATTTTAAAAGGAAACCTTGACTGTGTCAGGGAGAGTTCTACTTCTGTTGAGGGTAACTTATCAAGTGTGGGAATGAGTAAAATGGGAGACAGAAGACGGGCCAAAGCAGAGAAAACTATCACTTTGCAAGTTCTAAGACAATATTTTGCTGGAAGCCTAAAAGACGCTGCAAAGAATATCGGTGTGTGTACTACAACCTTGAAAAGGATCTGCCGGCAACATGGGATAAAGCGTTGGCCATCCCGAAAGATAAAAAAGGTTGGTCACTCCTTACAGAAACTTCAACTTGTGATTGACTCGGTTCAAGGTGTCTCTGGGGCATTTCAAATCGATTCTTTCTATTCAAACTTCCCAGACCTAGCTTCTCCAAACTTATCAGGAACCAAACTGTTCTCAACTTTCAATCAAACTGATAATCCAAACTCAATAAGCACGCAGCCAGATCCTGGCGCATTGAGTCCAGAAGGCACGTCAAAATCTCCCTCTTCATCCTGCGGTCAGAGTTCCATTTCAAGCCATTCCTACTCCAGCATGTCAGAGCTACAGCAGCTTCACACAACTAACATTGCCGGTAAGAAAGATTCCACCACGGCTGGTGAAGATTCTGCTGATGTAGCGTTGAAGAGGATCAGAAGCGAAGCAGAGCTTAAAAGCCTGAATCAGGATAAAGCAAAGCTCTTGCCAAGATCACTAAGCCAGGAAACACTTGGTGAGCACCCAAAAAATCAGTATCAACGACCCTTGTTGAAAACAAGTAGCAAGGTGGATGCTCACAGAGTGAAAGTCACATATGGTGATGAGAAAACTCGGTTTCGGATGCCCAAGAACTGGGGCTATGAAGATCTTCTGCAGGAAATTGGTGGGAGATTTAACGTGAGTGACATGAAGAAGTTTGATGTGAAATACTTGGATGATGACTGTGAGTGGGTACTACTCACTTGTGATGCTGACTTAGAGGAATGCATTGATGTTTGTCAATCTTCTGAAAGCGGCACCATCAAACTAAGCCTACAAACCTCTACTCATAGTATGAGAAGTTCTTTAGAATTTAGGTAA 2745 0.4485 MMRDGDVTSSSATMMEASPPDGTTTSMDFDYMGELFYDGCWLEASVDGSDFLLQSPSYSNPLFDPSFSWPALETNHNESQGTAFGTQEEGHNNNVVAARGGGGGGQQFQPETISIEGASDGVRRWRFAPTPSPAPGPSIMEKLVRALMRIKDYNRNKNMLIQIWVPVHRGGRPILAANDILFSLDSRSMNLAKYREISVRYEFSAEEGEVKELVPVEEGDSKELVLGLPGRVFRDKVPEWTPDVRFFRSDEYPRLDHAQEYDVSGSLAVPIFEQGSKMCLGVIEVVMTTQQINYGPELESVCKALEAVDLRSSKQLSIQNVKACNRSYEAVLPEIQQVLRSACEMHKLPLAQTWIPCVQQGKEGCRHSEDNYLFCISPAEHACYVGDPKIRSFHESCTEHHLLKGEGVAGGAFMTNQPCFSDDITSLSKKDYPLSHHARLFGLRAAVAIRLRSIYNSTDDFVLEFFLPVDCNDSEEQRNMLTSLSIIIQRVCRSLRVISDKELVEAKLSIDEGISLADSGFDRTAICEELQHKGTVASFDTEEKLSETTGRKFSDPMQQQESPILKGNLDCVRESSTSVEGNLSSVGMSKMGDRRRAKAEKTITLQVLRQYFAGSLKDAAKNIGVCTTTLKRICRQHGIKRWPSRKIKKVGHSLQKLQLVIDSVQGVSGAFQIDSFYSNFPDLASPNLSGTKLFSTFNQTDNPNSISTQPDPGALSPEGTSKSPSSSCGQSSISSHSYSSMSELQQLHTTNIAGKKDSTTAGEDSADVALKRIRSEAELKSLNQDKAKLLPRSLSQETLGEHPKNQYQRPLLKTSSKVDAHRVKVTYGDEKTRFRMPKNWGYEDLLQEIGGRFNVSDMKKFDVKYLDDDCEWVLLTCDADLEECIDVCQSSESGTIKLSLQTSTHSMRSSLEFR* 915
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g01892 914 Gene3D - 818 902 - -
Phac9g01892 914 Pfam PB1 domain 821 902 IPR000270 GO:0005515
Phac9g01892 914 ProSiteProfiles PB1 domain profile. 820 903 IPR000270 GO:0005515
Phac9g01892 914 Pfam RWP-RK domain 602 650 IPR003035 -
Phac9g01892 914 PANTHER PROTEIN NLP8 114 910 IPR045012 GO:0003700
Phac9g01892 914 MobiDBLite consensus disorder prediction 1 23 - -
Phac9g01892 914 SMART PB1_new 820 903 IPR000270 GO:0005515
Phac9g01892 914 MobiDBLite consensus disorder prediction 694 741 - -
Phac9g01892 914 SUPERFAMILY CAD & PB1 domains 819 905 - -
Phac9g01892 914 CDD PB1_NLP 821 901 IPR034891 -
Phac9g01892 914 ProSiteProfiles RWP-RK domain profile. 589 670 IPR003035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g01892 Phac-Chr9 17910534 17916032 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g01892 15 905 NLP Transcription Factor Family AT1G20640 47.409 0.0 735
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Phac9g01892 PB1 1.2e-18 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g01892 - - gmx:100785135 1495.33