Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g01889 ATGGGAAACTGTCTTCGAAAGCCTGATGATGGTAACAAAACTCAGTACAAGATTCCCACCATGAATAAGCCTCCCCAAGGAAGATCAGAGAAAAAGGGAATCACGGAAGGAAAAAATGAAGAAGAGGTGAGAAAACTTATAAACTACACATTGGATGAGTTGAAAAGTATAACAAGAAACTTCAGACCAGACACGGTTTTAGGTGAAGGTGGTTTTGGACGTGTTTTCAAAGGGTGGATTGATAAGAATACGTTGAAACCCTCGAGAGTTGGTGTTGGAATTCCCGTTGCGGTGAAGAAATCTAACCCTGATAGCCTTCAGGGTCTACAAGAATGGAAGAGTGAAGTGCAATTTTTGGGGAAGCTCTCTCATCCAAACCTAGTTAAATTAATTGGCTACTGCTGGGAGGATAATCAATTCCTGCTGGTATACGAATACATGCAAAAGGGAAGTCTTGAAAGCCACCTGTTCAGAAAACCACTCTCATGGGATATAAGACTGAAGATAGCAATAGGAGCAGCCAGAGGACTAGCTTTCTTGCATACATCAGAGAAGTCTGTCATCTATCGAGACTTCAAATCCTCCAACATTTTGCTTGATGGGGATTTCAATGCCAAGCTATCAGATTTTGGACTGGCAAAGCTTGGCCCCGTCAACGGTAGATCCCACGTAACCACGCGGGTCATGGGCACCTATGGTTACGCAGCACCTGAATACGTCGCCACAGGGCACCTGTATGTTAAAAGCGATGTGTACGGATTCGGCGTTGTTCTGCTTGAAATATTAACGGGCAGAGCAGCTCTGGACACAAGCCAGCCCTCGGATATGCAGAATTTGGTGCAGTGCAGTATGTCATCTCTAAATGATAAAAAGAGACTGAAAAGGATAATGGACCAAAAAATGGAGGACCAATATTCACTTAGAGCTGCATTTCACGTAGCCCAACTTATCCTCAAATGTTTACAATCTGACCACAGAAAACGACCCTCCATGGTGGAGGTTTTGGCAACCTTAGAAAAAGCACAAACTATAAAGTACAAACCCAAAGAAAATAAAGCCTCTGCAATTCGTCAAACATCAGAGGTGCATCACTATAATAACCCACGTCGGTCACCACCACCGCTTCACAACAACGATTAG 1140 0.436 MGNCLRKPDDGNKTQYKIPTMNKPPQGRSEKKGITEGKNEEEVRKLINYTLDELKSITRNFRPDTVLGEGGFGRVFKGWIDKNTLKPSRVGVGIPVAVKKSNPDSLQGLQEWKSEVQFLGKLSHPNLVKLIGYCWEDNQFLLVYEYMQKGSLESHLFRKPLSWDIRLKIAIGAARGLAFLHTSEKSVIYRDFKSSNILLDGDFNAKLSDFGLAKLGPVNGRSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEILTGRAALDTSQPSDMQNLVQCSMSSLNDKKRLKRIMDQKMEDQYSLRAAFHVAQLILKCLQSDHRKRPSMVEVLATLEKAQTIKYKPKENKASAIRQTSEVHHYNNPRRSPPPLHNND* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g01889 379 ProSitePatterns Protein kinases ATP-binding region signature. 67 100 IPR017441 GO:0005524
Phac9g01889 379 MobiDBLite consensus disorder prediction 349 379 - -
Phac9g01889 379 PANTHER OS01G0588500 PROTEIN-RELATED 44 342 - -
Phac9g01889 379 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 147 352 - -
Phac9g01889 379 CDD STKc_IRAK 67 340 - -
Phac9g01889 379 Gene3D Phosphorylase Kinase; domain 1 32 146 - -
Phac9g01889 379 MobiDBLite consensus disorder prediction 358 379 - -
Phac9g01889 379 ProSiteProfiles Protein kinase domain profile. 61 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g01889 379 SUPERFAMILY Protein kinase-like (PK-like) 43 339 IPR011009 -
Phac9g01889 379 Pfam Protein tyrosine and serine/threonine kinase 65 337 IPR001245 GO:0004672|GO:0006468
Phac9g01889 379 MobiDBLite consensus disorder prediction 1 37 - -
Phac9g01889 379 ProSitePatterns Serine/Threonine protein kinases active-site signature. 187 199 IPR008271 GO:0004672|GO:0006468
Phac9g01889 379 FunFam Serine/threonine-protein kinase BIK1 28 146 - -
Phac9g01889 379 Gene3D Transferase(Phosphotransferase) domain 1 147 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g01889 Phac-Chr9 17843878 17846879 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g01889 10 338 Glycoside Hydrolase AT3G07070 46.429 1.72e-95 289
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Phac9g01889 Pkinase 1.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g01889 - - gmx:100812725 568.54