Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g01888 ATGGGAAACTGTCTTCGAAAGCCTGATGATGGTAACAAAACTCAGTACAAGATTCCCACCATGAATAAGCCTCCCCAAGGAAGATCAGAGAAAAAGGGAATCACGGAAGGAAAAAATGAAGAAGAGGTGAGAAAACTTATAAACTACACATTGGATGAGTTGAAAAGTATAACAAGAAACTTCAGACCAGACACGGTTTTAGGTGAAGGTGGTTTTGGACGTGTTTTCAAAGGGTGGATTGATAAGAATACGTTGAAACCCTCGAGAGTTGGTGTTGGAATTCCCGTTGCGGTGAAGAAATCTAACCCTGATAGCCTTCAGGGTCTACAAGAATGGAAGAGTGAAGTGCAATTTTTGGGGAAGCTCTCTCATCCAAACCTAGTTAAATTAATTGGCTACTGCTGGGAGGATAATCAATTCCTGCTGGTATACGAATACATGCAAAAGGGAAGTCTTGAAAGCCACCTGTTCAGAAGAGGTCCAGAACCACTCTCATGGGATATAAGACTGAAGATAGCAATAGGAGCAGCCAGAGGACTAGCTTTCTTGCATACATCAGAGAAGTCTGTCATCTATCGAGACTTCAAATCCTCCAACATTTTGCTTGATGGGGATTTCAATGCCAAGCTATCAGATTTTGGACTGGCAAAGCTTGGCCCCGTCAACGGTAGATCCCACGTAACCACGCGGGTCATGGGCACCTATGGTTACGCAGCACCTGAATACGTCGCCACAGGGCACCTGTATGTTAAAAGCGATGTGTACGGATTCGGCGTTGTTCTGCTTGAAATATTAACGGGCAGAGCAGCTCTGGACACAAGCCAGCCCTCGGATATGCAGAATTTGGTGCAGTGCAGTATGTCATCTCTAAATGATAAAAAGAGACTGAAAAGGATAATGGACCAAAAAATGGAGGACCAATATTCACTTAGAGCTGCATTTCACGTAGCCCAACTTATCCTCAAATGTTTACAATCTGACCACAGAAAACGACCCTCCATGGTGGAGGTTTTGGCAACCTTAGAAAAAGCACAAACTATAAAGTACAAACCCAAAGAAAATAAAGCCTCTGCAATTCGTCAAACATCAGAGGTGCATCACTATAATAACCCACGTCGGTCACCACCACCGCTTCACAACAACGATTAG 1149 0.4378 MGNCLRKPDDGNKTQYKIPTMNKPPQGRSEKKGITEGKNEEEVRKLINYTLDELKSITRNFRPDTVLGEGGFGRVFKGWIDKNTLKPSRVGVGIPVAVKKSNPDSLQGLQEWKSEVQFLGKLSHPNLVKLIGYCWEDNQFLLVYEYMQKGSLESHLFRRGPEPLSWDIRLKIAIGAARGLAFLHTSEKSVIYRDFKSSNILLDGDFNAKLSDFGLAKLGPVNGRSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEILTGRAALDTSQPSDMQNLVQCSMSSLNDKKRLKRIMDQKMEDQYSLRAAFHVAQLILKCLQSDHRKRPSMVEVLATLEKAQTIKYKPKENKASAIRQTSEVHHYNNPRRSPPPLHNND* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g01888 382 ProSitePatterns Protein kinases ATP-binding region signature. 67 100 IPR017441 GO:0005524
Phac9g01888 382 SUPERFAMILY Protein kinase-like (PK-like) 41 341 IPR011009 -
Phac9g01888 382 Gene3D Phosphorylase Kinase; domain 1 32 146 - -
Phac9g01888 382 MobiDBLite consensus disorder prediction 352 382 - -
Phac9g01888 382 Pfam Protein tyrosine and serine/threonine kinase 65 340 IPR001245 GO:0004672|GO:0006468
Phac9g01888 382 MobiDBLite consensus disorder prediction 361 382 - -
Phac9g01888 382 ProSiteProfiles Protein kinase domain profile. 61 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g01888 382 PANTHER OS01G0588500 PROTEIN-RELATED 44 345 - -
Phac9g01888 382 FunFam Serine/threonine-protein kinase PBS1 147 359 - -
Phac9g01888 382 MobiDBLite consensus disorder prediction 1 37 - -
Phac9g01888 382 ProSitePatterns Serine/Threonine protein kinases active-site signature. 190 202 IPR008271 GO:0004672|GO:0006468
Phac9g01888 382 FunFam Serine/threonine-protein kinase BIK1 28 146 - -
Phac9g01888 382 CDD STKc_IRAK 67 343 - -
Phac9g01888 382 Gene3D Transferase(Phosphotransferase) domain 1 147 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g01888 Phac-Chr9 17843878 17846879 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g01888 10 341 Glycoside Hydrolase AT3G07070 46.726 1.31e-96 292
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Phac9g01888 PK_Tyr_Ser-Thr 2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g01888 - - gmx:100812725 579.326