Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g01887 ATGAGTTGTTTTTCCTGCTTTGTTTCTCGCCGGAAAGATGTCAGGAGGGTTGAAATTGACAATGGCGCTCGATCTGCTGCTACTGCTGCTTCCTCAGAGGGTGAAAGGAAGAGAGAATCCTCAGAGGCAAAGGGGAAGAGTATTAGCAGTAGTAAAGCAAGTACTGCAGCGGCTAGTTTTGGTTTTCGCGAACTTGCTGCGGCGACGAGGGGTTTCAAGGAAGTGAATTTAATCGGGGAAGGTGGTTTTGGAAGGGTTTACAAGGGTCGACTTTCAACGGGCGAGCTTGTTGCCGTGAAACAATTGAGTCATGATGGTCGGCAAGGTTTTCAGGAATTTGTGACGGAGGTTCTTATGCTGAGCCTGCTGCACCATTCTAATCTTGTGAAGTTAATTGGCTACTGCACTGATGGAGATCAAAGGCTTTTGGTTTATGAGTACATGCCCATGGGTTCTCTGGAGGATCATCTTTTTGATCCTACCCAAGACAAAGAACCCCTAAGTTGGAGTTCTCGAATGAAGATTGCTGTTGGAGCTGCTCGTGGCCTCGAGTATCTCCATTGTAAAGCAGATCCACCTGTTATCTACAGAGACTTGAAATCTGCTAACATCTTGTTAGATAATGAATTCAACCCAAAACTGTCAGATTTTGGGCTTGCTAAACTTGGACCTGTTGGAGACAATACCCATGTTTCAACCAGAGTAATGGGAACATATGGCTACTGTGCGCCCGAGTATGCCATGAGTGGCAAATTAACTCTTAAATCTGATATATACAGCTTTGGTGTGGTTTTGTTGGAGTTGATCACTGGACGTAGAGCAATAGATGCCAGTAGAAAACCAGGAGAGCAGAACTTGGTTTCATGGTCTCGCCCATATTTTAGTGATCGGAGAAAGTTTGTACATATGGTAGACCCTCTTTTACAAGGCAACTTCCCCTTGCGCTGTTTGCATCAGGCAATTGCTATAACTGCTATGTGTCTCCAGGAGCAACCAAAATTCCGTCCACTTATTGGTGATATTGTTGTTGCACTAGAATACCTAGCTTCTCAGAGTATTGCTGAAGTGCATAGACATGGTGGGCGCAGCTCACCGCAACAACCATCTTCTGAAATCGACAGAAATTAA 1128 0.4495 MSCFSCFVSRRKDVRRVEIDNGARSAATAASSEGERKRESSEAKGKSISSSKASTAAASFGFRELAAATRGFKEVNLIGEGGFGRVYKGRLSTGELVAVKQLSHDGRQGFQEFVTEVLMLSLLHHSNLVKLIGYCTDGDQRLLVYEYMPMGSLEDHLFDPTQDKEPLSWSSRMKIAVGAARGLEYLHCKADPPVIYRDLKSANILLDNEFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRRAIDASRKPGEQNLVSWSRPYFSDRRKFVHMVDPLLQGNFPLRCLHQAIAITAMCLQEQPKFRPLIGDIVVALEYLASQSIAEVHRHGGRSSPQQPSSEIDRN* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g01887 375 SMART serkin_6 72 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g01887 375 ProSiteProfiles Protein kinase domain profile. 72 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g01887 375 MobiDBLite consensus disorder prediction 22 48 - -
Phac9g01887 375 Gene3D Transferase(Phosphotransferase) domain 1 148 363 - -
Phac9g01887 375 ProSitePatterns Protein kinases ATP-binding region signature. 78 100 IPR017441 GO:0005524
Phac9g01887 375 SUPERFAMILY Protein kinase-like (PK-like) 51 346 IPR011009 -
Phac9g01887 375 MobiDBLite consensus disorder prediction 31 45 - -
Phac9g01887 375 Gene3D Phosphorylase Kinase; domain 1 29 147 - -
Phac9g01887 375 PANTHER OS07G0668900 PROTEIN 3 354 - -
Phac9g01887 375 Pfam Protein kinase domain 72 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g01887 375 CDD STKc_IRAK 78 346 - -
Phac9g01887 375 FunFam Serine/threonine-protein kinase PBS1 148 362 - -
Phac9g01887 375 ProSitePatterns Serine/Threonine protein kinases active-site signature. 194 206 IPR008271 GO:0004672|GO:0006468
Phac9g01887 375 FunFam probable serine/threonine-protein kinase RLCKVII 44 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g01887 Phac-Chr9 17826979 17831858 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g01887 1 371 Glycoside Hydrolase AT3G07070 57.853 1.03e-153 437
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Phac9g01887 Pkinase 5.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g01887 - - gmx:100796595 601.668