Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g01886 ATGAGTTGTTTTTCCTGCTTTGTTTCTCGCCGGAAAGATGTCAGGAGGGTTGAAATTGACAATGGCGCTCGATCTGCTGCTACTGCTGCTTCCTCAGAGGGTGAAAGGAAGAGAGAATCCTCAGAGGCAAAGGGGAAGAGTATTAGCAGTAGTAAAGCAAGTACTGCAGCGGCTAGTTTTGGTTTTCGCGAACTTGCTGCGGCGACGAGGGGTTTCAAGGAAGTGAATTTAATCGGGGAAGGTGGTTTTGGAAGGGTTTACAAGGGTCGACTTTCAACGGGCGAGCTTGTTGCCGTGAAACAATTGAGTCATGATGGTCGGCAAGGTTTTCAGGAATTTGTGACGGAGGTTCTTATGCTGAGCCTGCTGCACCATTCTAATCTTGTGAAGTTAATTGGCTACTGCACTGATGGAGATCAAAGGCTTTTGGTTTATGAGTACATGCCCATGGGTTCTCTGGAGGATCATCTTTTTGGTAAACTTATTTTTGATCCTACCCAAGACAAAGAACCCCTAAGTTGGAGTTCTCGAATGAAGATTGCTGTTGGAGCTGCTCGTGGCCTCGAGTATCTCCATTGTAAAGCAGATCCACCTGTTATCTACAGAGACTTGAAATCTGCTAACATCTTGTTAGATAATGAATTCAACCCAAAACTGTCAGATTTTGGGCTTGCTAAACTTGGACCTGTTGGAGACAATACCCATGTTTCAACCAGAGTAATGGGAACATATGGCTACTGTGCGCCCGAGTATGCCATGAGTGGCAAATTAACTCTTAAATCTGATATATACAGCTTTGGTGTGGTTTTGTTGGAGTTGATCACTGGACGTAGAGCAATAGATGCCAGTAGAAAACCAGGAGAGCAGAACTTGGTTTCATGGTCTCGCCCATATTTTAGTGATCGGAGAAAGTTTGTACATATGGTAGACCCTCTTTTACAAGGCAACTTCCCCTTGCGCTGTTTGCATCAGGCAATTGCTATAACTGCTATGTGTCTCCAGGAGCAACCAAAATTCCGTCCACTTATTGGTGATATTGTTGTTGCACTAGAATACCTAGCTTCTCAGAGTATTGCTGAAGTGCATAGACATGGTGGGCGCAGCTCACCGCAACAACCATCTTCTGAAATCGACAGAAATTAA 1143 0.4462 MSCFSCFVSRRKDVRRVEIDNGARSAATAASSEGERKRESSEAKGKSISSSKASTAAASFGFRELAAATRGFKEVNLIGEGGFGRVYKGRLSTGELVAVKQLSHDGRQGFQEFVTEVLMLSLLHHSNLVKLIGYCTDGDQRLLVYEYMPMGSLEDHLFGKLIFDPTQDKEPLSWSSRMKIAVGAARGLEYLHCKADPPVIYRDLKSANILLDNEFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRRAIDASRKPGEQNLVSWSRPYFSDRRKFVHMVDPLLQGNFPLRCLHQAIAITAMCLQEQPKFRPLIGDIVVALEYLASQSIAEVHRHGGRSSPQQPSSEIDRN* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g01886 380 SMART serkin_6 72 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g01886 380 FunFam probable serine/threonine-protein kinase RLCKVII 44 147 - -
Phac9g01886 380 SUPERFAMILY Protein kinase-like (PK-like) 51 351 IPR011009 -
Phac9g01886 380 MobiDBLite consensus disorder prediction 22 48 - -
Phac9g01886 380 ProSitePatterns Protein kinases ATP-binding region signature. 78 100 IPR017441 GO:0005524
Phac9g01886 380 MobiDBLite consensus disorder prediction 31 45 - -
Phac9g01886 380 FunFam Serine/threonine-protein kinase PBS1 148 367 - -
Phac9g01886 380 Gene3D Phosphorylase Kinase; domain 1 29 147 - -
Phac9g01886 380 ProSiteProfiles Protein kinase domain profile. 72 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g01886 380 Pfam Protein kinase domain 72 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g01886 380 ProSitePatterns Serine/Threonine protein kinases active-site signature. 199 211 IPR008271 GO:0004672|GO:0006468
Phac9g01886 380 PANTHER OS07G0668900 PROTEIN 3 359 - -
Phac9g01886 380 CDD STKc_IRAK 78 351 - -
Phac9g01886 380 Gene3D Transferase(Phosphotransferase) domain 1 148 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g01886 Phac-Chr9 17826979 17831858 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g01886 1 376 Glycoside Hydrolase AT3G07070 57.106 2.25e-151 432
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Phac9g01886 Pkinase 3.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g01886 - - gmx:100796595 595.504